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Commits on Oct 14, 2022

• Update intronarrator.sh

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• Update intronarrator.sh

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• Update intronarrator.sh

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Commits on Sep 27, 2022

• Update intronarrator.sh

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Commits on Aug 20, 2021

• Update README.rst

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• Update remove_introns.py

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• Update pysam_count_reads.py

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• Update add_introns_back_to_AUGUSTUS_gff.py

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• Update tRNAscan-SE_to_GFF.py

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• Update infernal_filter.py

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• Update samtools_extract_stranded_bams.sh

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• Update hisat2_map.sh

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Commits on Jun 17, 2021

• Update intronarrator.sh

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• Update intronarrator.sh

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• Update bam2hints.sh

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Commits on Apr 21, 2021

• Update README.rst

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• Update env.yml

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• Update README.rst

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• Update README.rst

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• Update README.rst

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• Update env.yml

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Commits on Mar 24, 2021

• Update intronarrator.sh

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• Update intronarrator.sh

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• Update intronarrator.sh

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• Update README.rst

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• Merge pull request #1 from Swart-lab/dev_kbs

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Commits on Mar 23, 2021

• Fix bug minus strand cmsearch not masked

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• Merge branch 'kbs' into dev_kbs

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• Merge branch 'master' into dev_kbs

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• Count Infernal score column index from 0

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Commits on Feb 16, 2021

• Fix README.

  

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• Fix README.

  

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• Diagram description

  

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• Link to AUGUSTUS

  

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• README updated with warning about limitation.

  

  Estienne Swart

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