.gitmodules

[submodule "external/base/solvers/lusol"]
	path = external/base/solvers/lusol
	url = https://github.com/nwh/lusol.git
	ignore = dirty
[submodule "external/base/solvers/pdco"]
	path = external/base/solvers/pdco
	url = https://github.com/mxsaunders/pdco.git
	ignore = dirty
[submodule "external/base/utilities/Smith-Decomposition"]
	path = external/base/utilities/Smith-Decomposition
	url = https://github.com/nbfigueroa/Smith-Decomposition.git
	ignore = dirty
[submodule "binary"]
	path = binary
	url = https://github.com/opencobra/COBRA.binary.git
	ignore = dirty
[submodule "external/analysis/gaimc"]
	path = external/analysis/gaimc
	url = https://github.com/dgleich/gaimc.git
	ignore = dirty
[submodule "test/models"]
	path = test/models
	url = https://github.com/LCSB-BioCore/COBRA.models
	ignore = dirty
[submodule "external/analysis/Volume-and-Sampling"]
	path = external/analysis/Volume-and-Sampling
	url = https://github.com/Bounciness/Volume-and-Sampling.git
	ignore = dirty
[submodule "external/analysis/CnaCobraInterface"]
	path = external/analysis/CnaCobraInterface
	url = https://github.com/SteffKlamt/CnaCobraInterface.git
	ignore = dirty
[submodule "COBRA.tutorials"]
	path = tutorials
	url = https://github.com/opencobra/COBRA.tutorials.git
	ignore = dirty
[submodule "COBRA.papers"]
	path = papers
	url = https://github.com/opencobra/COBRA.papers.git
	ignore = dirty
[submodule "external/base/utilities/rdir"]
	path = external/base/utilities/rdir
	url = https://github.com/LCSB-BioCore/rdir.git
	ignore = dirty
[submodule "external/analysis/mptoolbox"]
	path = external/analysis/mptoolbox
	url = https://github.com/LCSB-BioCore/mptoolbox.git
	ignore = dirty
[submodule "external/analysis/octave-networks-toolbox"]
	path = external/analysis/octave-networks-toolbox
	url = https://github.com/aeolianine/octave-networks-toolbox.git
	ignore = dirty
[submodule "external/base/samplers/looplessFluxSampler"]
	path = external/base/samplers/looplessFluxSampler
	url = https://github.com/rmtfleming/looplessFluxSampler