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Commits on Jul 13, 2023

• Merge branch 'fix-libpcre-update' into 'master'

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  GabrielAbdou

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• fix(clinvcf): 🐛 libpcre version update.

  

  “GabrielAbdou”

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Commits on Jul 12, 2023

• Merge branch 'fix-ci-runner-change' into 'master'

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  GabrielAbdou

  committed
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• fix(clinvcf): 🐛 using bio-info team ci runner.

  

  GabrielAbdou

  committed
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Commits on Jul 7, 2023

• Merge branch 'fix-unknown-chrom-GRCh38' into 'master'

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  GabrielAbdou

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• skipping unknown chromosome for GRCh38

  

  GabrielAbdou

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Commits on Jul 27, 2022

• Merge branch 'fix-unknown-chrom-for-GRCh37' into 'master'

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  MelanieBroutin

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• fix: handling new variants with unknown chrom for reference GRCh37

  

  GabrielAbdou

  authored and

  MelanieBroutin

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Commits on Jul 25, 2022

• Merge branch '28-fix-adding-git-dependency' into 'master'

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  MelanieBroutin

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Commits on Jul 22, 2022

• fix: adding git installation in artefact build

  

  “GabrielAbdou”

  committed
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• Merge branch '27-fix-outOfBoundsError' into 'master'

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  Raphaël Lanos

  committed
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• fix: out of bounds error in find_nearest_upstream module

  

  “GabrielAbdou”

  committed
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• Merge branch '26-feat-updates-from-public-repository' into 'master'

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  Raphaël Lanos

  committed
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• fix GitLab CI: installing Git for test

  

  “GabrielAbdou”

  committed
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Commits on Nov 15, 2021

• ClinVCF now support reclassification from Conflict to (Likely)Benign variants (previously patho only)

  

  jaudoux

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Commits on Nov 9, 2021

• Add compVCF binary, to easily compare our VCF and the one generated by Clinvar

  

  jaudoux

  committed
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Commits on Jul 19, 2021

• Merge branch '25-update-readme-for-publication' into 'master'

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  Celine Elie

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• docs(README): 📝 #25 Update README for publication

  

  kevin.yauy

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Commits on Nov 24, 2020

• Merge branch '24-bug-on-variantlength' into 'master'

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  MelanieBroutin

  committed
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• fix(variantlength): 🐛 bug on cast

  MelanieBroutin

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Commits on Nov 20, 2020

• Merge branch '23-add-varianttype-and-variantlentgh' into 'master'

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  MelanieBroutin

  committed
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• fix(typo): ✏️ lenGth

  MelanieBroutin

  committed
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• improvement(clinvcf): ✨ add varianttype and vraiantlength

  MelanieBroutin

  committed
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Commits on Aug 25, 2020

• Merge branch '22-set-alias-management-system-as-option-instead-of-argument' into 'master'

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  Sacha Beaumeunier

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• docs(readme): 📝 update readme

  

  Sacha Beaumeunier

  committed
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• fix(aggregateVariantInGene): 🐛 if gene not in GFF remove gene so it can be annotated from scratch (alias usecase)

  

  Sacha Beaumeunier

  committed
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• feat(submission): ✨ use GFF to get entrezID to enrich submission in case HGNC table is not provide

  

  Sacha Beaumeunier

  committed
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• fix(variant_in_gene): 🐛 return gene in submission even if no hgnc table is given as parameter

  

  Sacha Beaumeunier

  committed
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Commits on Aug 24, 2020

• fix(hgnc): 🐛 set hgnc table as optional

  

  Sacha Beaumeunier

  committed
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• refactor(option): ♻️ set --hgnc from mandatory to optional

  

  Sacha Beaumeunier

  committed
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Commits on Aug 3, 2020

• Merge branch '21-clinvcf-correct-node-list' into 'master'

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  Nicolas SOIRAT

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Commits on Jul 31, 2020

• fix(trait-nodes): 🐛 #21 take all trait nodes instead of one

  

  Nicolas SOIRAT

  committed
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• improvement(regex): ⬆️ #21 Add regex lib in nimble file. Minimum version : 0.13

  

  Nicolas SOIRAT

  committed
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• Merge branch '20-clinvcf-clinvcf-choose-the-wrong-gene-s-annotation-for-1-cases' into 'master'

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  Sacha Beaumeunier

  committed
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• style(cleaning): 👌 #20 remove commented debugger and reformat some part to be more readable

  

  Sacha Beaumeunier

  committed
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