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SaptaDey/README.md

๐Ÿงฌ Dr. Saptaswa Dey

Typing SVG

๐Ÿ”ฌ Biomedical Researcher | ๐Ÿง  AI Developer | ๐Ÿงฌ Computational Immunologist

LinkedIn Email ResearchGate

๐Ÿ‘จโ€๐Ÿ”ฌ About Me

"Bridging the gap between cutting-edge biomedical research and AI-driven scientific discovery"

I'm a Researcher at the Medical University of Graz, Austria, with over 10 years of experience in immunology, molecular biology, and inflammatory diseases. My passion lies at the intersection of biomedical research and artificial intelligence, where I develop innovative AI frameworks to accelerate scientific discovery.

๐Ÿ”ฌ Current Focus: Cutaneous malignancies, T-cell lymphoma, and AI-powered research methodologies
๐Ÿฅ Institution: University Clinic for Dermatology and Venerology, Medical University of Graz
๐ŸŽฏ Mission: Leveraging AI to revolutionize biomedical research and accelerate therapeutic discoveries


๐Ÿš€ Featured AI Research Projects

๐Ÿง  NexusMind 2.0

Next-Generation AI Reasoning Framework for Scientific Research

  • Advanced graph-based reasoning for complex scientific problems
  • Multi-modal AI integration for biomedical data analysis
  • Tech Stack: Python, HTML, JavaScript

AI Reasoning Framework for Scientific Research

  • Sophisticated reasoning workflows using graph-based representations
  • Model Context Protocol (MCP) implementation
  • Tech Stack: Python, HTML, JavaScript, TypeScript

Unified Platform for Biomedical AI Models

  • Integration of Microsoft/BioGPT, Falcon 40B, and OpenAI GPT
  • Streamlit-based user interface for researchers
  • Focus: Making advanced AI accessible to biomedical researchers

๐Ÿงฌ scGPT

Single-Cell Genomics AI Framework

  • Advanced single-cell data analysis using transformer models
  • Jupyter-based research environment
  • Application: Cutting-edge genomics research

๐Ÿ› ๏ธ Technical Arsenal

Programming Languages

Python R JavaScript TypeScript Groovy

AI/ML & Data Science

TensorFlow PyTorch Streamlit Jupyter

Bioinformatics & Research Tools

Docker Git HTML5


๐ŸŽฏ Research Expertise

๐Ÿงฌ Biomedical Research

  • Immunology & Molecular Biology
  • Cutaneous T-cell Lymphoma
  • STAT3/5 Signaling Pathways
  • Microbiome Analysis
  • Gene Editing (CRISPR/Cas9)
  • Flow Cytometry & Cell Sorting

๐Ÿค– AI & Computational Biology

  • Graph-of-Thoughts Reasoning
  • Large Language Models (LLMs)
  • Bioinformatics Pipeline Development
  • Single-cell Genomics AI
  • Scientific Data Analysis
  • Model Context Protocol (MCP)

๐Ÿ“Š GitHub Analytics

Sapta's GitHub stats

Top Langs


๐Ÿ† Recent Achievements & Recognition

  • ๐Ÿฅ‡ WVSD Research Grant 2023 - Scientific Association of Styrian Dermatology
  • ๐ŸŒ EADV Grant - International Societies for Investigative Dermatology, Tokyo
  • ๐Ÿ… ADF Award - German Dermatological Society 2023
  • ๐ŸŽ–๏ธ ร–GDV Prize 2022 - Vienna, Austria
  • ๐Ÿ’ฐ DK-MOLIN International Ph.D. Scholarship - Austrian Science Fund (FWF) 2017-2021
  • ๐Ÿ“š 13+ Peer-reviewed Publications in high-impact journals

๐ŸŒ Professional Network

Active Member of Leading Scientific Organizations:

๐Ÿ”ฌ European Society for Dermatological Research (ESDR)
๐ŸŽ“ European Academy of Dermatology (EADV)
๐Ÿงฌ American Association for Cancer Research (AACR)
๐Ÿ”ญ European Association for Cancer Research (EACR)
โš—๏ธ European Society for Photobiology (ESP)


๐Ÿ“ˆ Current Research Impact

  • 13+ Publications in peer-reviewed journals
  • Multiple Conference Presentations across Europe and USA
  • Active Collaborations with international research teams
  • Innovative AI Frameworks for scientific research acceleration

๐ŸŽฏ Vision & Goals

"My goal is to democratize AI-powered scientific research tools, making cutting-edge technology accessible to researchers worldwide while advancing our understanding of complex biological systems."

๐Ÿš€ Current Projects

  • Developing next-generation AI reasoning frameworks for biomedical research
  • Creating open-source tools for scientific data analysis
  • Bridging the gap between AI and traditional laboratory research

๐Ÿ”ฎ Future Aspirations

  • Establish a comprehensive AI-driven research platform
  • Contribute to breakthrough discoveries in cancer immunotherapy
  • Mentor the next generation of AI-biomedical researchers

๐Ÿ“ฌ Let's Connect!

I'm always excited to collaborate on innovative projects at the intersection of AI and biomedical research!

๐Ÿ“ง Email: saptaswa.dey@medunigraz.at
๐Ÿข Location: Graz, Austria

"Innovation happens at the intersection of disciplines - let's create the future of scientific research together!"


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  1. Graph-of-Thought-MCP Graph-of-Thought-MCP Public

    The Advanced Scientific Research (ASR) Graph of Thoughts (GoT) MCP server is a highly efficient implementation of the Model Context Protocol (MCP) that allows for sophisticated reasoning workflows โ€ฆ

    Python 4 3

  2. Adaptive-Graph-of-Thoughts-MCP-server Adaptive-Graph-of-Thoughts-MCP-server Public

    AI Reasoning Framework for Scientific Research

    Python 4