From 7035fd790b25cf01be47b939b18ca93f7b1990a3 Mon Sep 17 00:00:00 2001 From: jangorecki Date: Thu, 21 Sep 2023 09:23:22 +0200 Subject: [PATCH] add curl os dep --- .github/workflows/pkgup.yaml | 3 +++ 1 file changed, 3 insertions(+) diff --git a/.github/workflows/pkgup.yaml b/.github/workflows/pkgup.yaml index 3771c2001..ce9059cc0 100644 --- a/.github/workflows/pkgup.yaml +++ b/.github/workflows/pkgup.yaml @@ -25,6 +25,9 @@ jobs: path: ${{ env.R_LIBS_USER }}/* key: library-cache-${{ github.run_id }} restore-keys: library-cache + - name: setup-os-dependencies + run: | + sudo apt-get install -y libcurl4-openssl-dev - name: setup-r-dependencies run: | Rscript -e 'stopifnot(file.copy("DESCRIPTION", file.path(tdir<-tempdir(), "PACKAGES"))); db<-available.packages(paste0("file://", tdir)); deps<-setdiff(tools::package_dependencies(read.dcf("DESCRIPTION", fields="Package")[[1L]], db, which="most")[[1L]], installed.packages(priority="high")[,"Package"]); if (length(deps)) { ap<-available.packages()[,"Version"]; ap<-ap[names(ap) %in% deps]; if (!all(deps%in%names(ap))) stop("dependencies are not avaiable in repository: ",paste(setdiff(deps, names(ap)), collapse=", ")); ip<-installed.packages()[,"Version"]; ip<-ip[names(ip) %in% deps]; pkgs<-ap[deps]>ip[deps]; install.packages(names(pkgs[pkgs|is.na(pkgs)]), INSTALL_opts="--html") }'