MATLAB Code for Reproducing Results

This repository contains MATLAB code to reproduce results from the paper:

"Bistability in Type I Toxin-Antitoxin Systems May Lead to Stress-Induced Persister Formation"
by Sofija Markovic, Magdalena Djordjevic, Hong-Yu OU, and Marko Djordjevic

Scripts

The scripts in this repository are provided to reproduce the results presented in the paper. Each script is documented with comments that explain its functionality. Where applicable, dependencies on external functions (included within the repository) are noted in the comments.

Phase Portrait Plotter

• Phase Portrait Plotter: Modified version of the original code (available at MathWorks File Exchange) used for Figure S2. The modifications were made for visual consistency with the paper's figures.

Notes

• The code is developed with MATLAB R2024a but should also be compatible with earlier versions.
• Ensure that all required MATLAB toolboxes are installed for the scripts to run correctly. (Statistics and Machine Learning Toolbox)
• If you encounter any issues or have questions, please refer to the comments within each script or contact Sofija Markovic at sofija.markovic@bio.bg.ac.rs.

License

This project is licensed under the MIT License. See the MIT License for details.