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Merged
merged 6 commits into from
Jul 25, 2023
Merged

feat: add clDice loss #6763

merged 6 commits into from
Jul 25, 2023

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@SauravMaheshkar
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@SauravMaheshkar SauravMaheshkar commented Jul 24, 2023 •
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Fixes #5938

Description

This PR aims to add the SoftclDiceLoss and the SoftDiceclDiceLoss from clDice - a Novel Topology-Preserving Loss Function for Tubular Structure Segmentation

Types of changes

  • Non-breaking change (fix or new feature that would not break existing functionality).
  • Breaking change (fix or new feature that would cause existing functionality to change).
  • New tests added to cover the changes.
  • Integration tests passed locally by running ./runtests.sh -f -u --net --coverage.
  • Quick tests passed locally by running ./runtests.sh --quick --unittests --disttests.
  • In-line docstrings updated.
  • Documentation updated, tested make html command in the docs/ folder.

wyli
wyli reviewed Jul 24, 2023
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@SauravMaheshkar
feat: add clDice loss
4595dbd 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@SauravMaheshkar
feat: add clDice imports to losses/__init__.py
aa7200c 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@SauravMaheshkar
fix: add type hints
aadce2a 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@SauravMaheshkar
feat: add tests for clDice
4dd80a4 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@SauravMaheshkar
style: lint clDice tests
a2dab60 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@SauravMaheshkar
fix: type hint
2303b30 
Signed-off-by: Saurav Maheshkar <sauravvmaheshkar@gmail.com>
@wyli
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wyli commented Jul 25, 2023

/build

wyli
wyli approved these changes Jul 25, 2023
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Thanks, it looks good to me.

@wyli wyli merged commit 2800a76 into Project-MONAI:dev Jul 25, 2023
@SauravMaheshkar SauravMaheshkar deleted the saurav/cldice-loss branch July 25, 2023 09:28
wyli
wyli reviewed Jul 25, 2023
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@wyli wyli wyli approved these changes

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feature request : please add cldice loss

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@SauravMaheshkar @wyli