@@ -11,7 +11,7 @@ default_prefix: coderdata
1111
1212slots :
1313 entrez_id :
14- description : Gene id according to NCIB
14+ description : Gene id according to NCBI
1515 range : integer
1616 improve_sample_id :
1717 description : Unique sample identifier for this dataset, generated by this package
@@ -22,10 +22,15 @@ slots:
2222 description : Unique identifier for this dataset, one for each smile string.
2323 identifier : true
2424 slot_uri : schema:identifier
25+ time :
26+ range : float
27+ description : Time at which measurement was administered, unit below.
28+ time_unit :
29+ description : Unit of time in which drug treatment was measured, e.g. minutes, hours, weeks.
2530 source :
26- description : Source of data
31+ description : Source of data generated.
2732 study :
28- description : study from which data is pooled
33+ description : Study informatiom identifying where/when data was collected.
2934 other_id :
3035 description : other identifier
3136 recommended : true
@@ -95,6 +100,8 @@ classes:
95100 - study
96101 attributes :
97102 transcriptomics :
103+ range : float
104+ description : Transcripts per million of sample at baseline.
98105 Proteomics :
99106 slots :
100107 - entrez_id
@@ -103,6 +110,8 @@ classes:
103110 - study
104111 attributes :
105112 proteomics :
113+ range : float
114+ description : Log-normalized log ratio of proteomics measurements of sample at baseline.
106115 Copy Number :
107116 slots :
108117 - entrez_id
@@ -112,8 +121,10 @@ classes:
112121 attributes :
113122 copy_number :
114123 range : float
124+ description : Copy number measurements of sample at baseline
115125 copy_call :
116126 range : CopyCall
127+ description : Categorical variable defining copy number measurement.
117128 Mutations :
118129 slots :
119130 - entrez_id
@@ -132,6 +143,8 @@ classes:
132143 - improve_sample_id
133144 - source
134145 - study
146+ - time
147+ - time_unit
135148 attributes :
136149 auc :
137150 range : float
@@ -164,6 +177,8 @@ classes:
164177 slots :
165178 - entrez_id
166179 - improve_sample_id
180+ - time
181+ - time_unit
167182 attributes :
168183 data_value :
169184 range : float
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