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Commits on Jul 26, 2022

• Merge pull request #170 from PEtab-dev/release_0.1.28

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• Sphinx !=5.1.0

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• Revert "pin markdown package"

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• Update release notes; bump version number

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Commits on Jul 25, 2022

• Fix deprecation warning from `get_model_for_condition` (#169)

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Commits on Jul 23, 2022

• Formatting

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Commits on Jul 22, 2022

• get_valid_parameters_for_parameter_table to __all__

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Commits on Jul 21, 2022

• Fix SBML validation (#168)

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Commits on Jul 20, 2022

• Fix typehints and deprecation warning (#165)

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Commits on Jul 19, 2022

• Various cleanup (#163)

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Commits on Jul 18, 2022

• Python support policy (#162)

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• pin markdown package

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Commits on Jul 11, 2022

• Fix validation for output parameters columns in the condition table (#161)

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Commits on Jul 10, 2022

• Merge pull request #160 from PEtab-dev/release_0.1.27

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Commits on Jul 7, 2022

• 0.1.27

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• Bump version number, update changelog

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Commits on Jul 5, 2022

• Add candidate schema for version 2 (#142)

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Commits on Jul 4, 2022

• Argument forwarding for Problem.get_optimization_to_simulation_parameter_mapping (#159)

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Commits on Jun 30, 2022

• Fix reading multiple parameter subset files from YAML (#157)

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Commits on Jun 22, 2022

• Add abstraction for (SBML) models (#133)

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Commits on Jun 14, 2022

• Fix use of multiple parameter files (#156)

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Commits on May 25, 2022

• get_parameter_df: Allow any collection of parameter tables (#153)

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• Add support for PEtab problems with multiple condition files (#152)

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Commits on May 24, 2022

• More informative petab.calculate errors (#151)

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Commits on May 20, 2022

• Fix handling of NaN values for parameters in condition table (#150)

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Commits on May 12, 2022

• Update the example_visualization_without_visspec notebook (#147)

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Commits on May 10, 2022

• Update visualization example notebooks (#146)

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Commits on May 4, 2022

• Remove deprecated visualization functions (#130)

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Commits on May 3, 2022

• Always re-execute example notebooks / use myst-nb (#144)

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• Update first vis example notebook; use non-deprecated functions (#137)

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• Exclude `math` from `from petab.C import *` (#143)

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Commits on Apr 29, 2022

• Refactor yaml validation schemas (#141)

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• Remove ancient deprecated functions related to specifying observables/noise models inside SBML (#140)

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• Make test runable from any directory

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• Simplify test model creation - use simplesbml (#139)

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