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Add a Docker container#527

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maol-corteva wants to merge 4 commits intoOpenGene:masterfrom
maol-corteva:master
Open

Add a Docker container#527
maol-corteva wants to merge 4 commits intoOpenGene:masterfrom
maol-corteva:master

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@maol-corteva
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This pull request adds a Dockerfile and instructions to build the container. It builds the image by pulling a pre-compiled binary version from the distribution (not compilation required)

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# FROM scratch
FROM ubuntu:20.04
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how about alpine which is more smaller

# Update the repository sources list
RUN apt-get update && apt-get install -y \
wget \
nano \
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nowhere to use nano?

# fastp v0.23.4
WORKDIR /app
RUN wget http://opengene.org/fastp/fastp.${FP_VERSION} \
&& mv fastp.${FP_VERSION} fastp \
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try to use ln -s

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2 participants