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Commits on Apr 4, 2021

• Merge pull request #5 from dpryan79/extern

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  NatPRoach

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Commits on Mar 31, 2021

• Prevent duplicate symbols, use extern

  dpryan79

  committed
  bc973fe

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Commits on Nov 24, 2020

• Merge pull request #4 from NatPRoach/style

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  NatPRoach

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• Fairly major style updates to get under 80 characters per line as recommended by nim style guide, adding conda badge to README, making bumping versioning easier.

  

  Nathan Roach

  committed
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Commits on Nov 23, 2020

• Updating nimble nimscript to make clean correctly, and modifying readme to reflect conda support

  

  Nathan Roach

  committed
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Commits on Nov 22, 2020

• fixing make and nimble files to allow for the possibility of CC variable being set

  

  Nathan Roach

  committed
  470b7f1

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• updating nimble file to reflect we need most recent nim because of AssertionError -> AssertionDefect name change

  

  Nathan Roach

  committed
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• Fixing help parsing to make it so error messages don't appear if you provide the help flag as the first input; fixing nimble file to compile poaV2 before build step

  

  Nathan Roach

  committed
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Commits on Nov 21, 2020

• Updating version before static release

  

  Nathan Roach

  committed
  10c6eba

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• Merge pull request #3 from NatPRoach/style

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  NatPRoach

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  947195a

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• More minor style updates

  

  Nathan Roach

  committed
  b302c91

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• Merge pull request #2 from NatPRoach/style

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  NatPRoach

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  accd852

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• Final style fixes

  

  Nathan Roach

  committed
  511f916

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• Updating c2nim bindings for poa, updating style convention for binding files

  

  Nathan Roach

  committed
  f65b9c4

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• Updating C code so to remove blocks leading to compiler warnings

  

  Nathan Roach

  committed
  c8a07f1

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• fixing compiler issue that only recently popped up for some reason

  

  Nathan Roach

  committed
  e9586e2

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• fixing compiler issue that only popped up now for some reason???

  

  Nathan Roach

  committed
  71112a6

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• style updates

  

  Nathan Roach

  committed
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• style updates for genomeKDE.nim

  

  Nathan Roach

  committed
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• make iterFASTQ accessible

  

  Nathan Roach

  committed
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• style updates for conduit_clustering.nim

  

  Nathan Roach

  committed
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• variable name style guide for poGraphUtils.nim

  

  Nathan Roach

  committed
  39acea2

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• style fixes, switching branches after this

  

  Nathan Roach

  committed
  e7b5839

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• style fixes in na, fixing warnings in conduit proper

  

  Nathan Roach

  committed
  b661042

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• Merge pull request #1 from NatPRoach/clustering

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  NatPRoach

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  8f4d6c6

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• Adding warning about conduit clustering

  

  Nathan Roach

  committed
  a0296eb

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• more code restructuring

  

  Nathan Roach

  committed
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Commits on Nov 20, 2020

• Restructuring code directories to conform to nimble standard, adding nimble install option, renamed functions to conform with fasta/q migration

  

  Nathan Roach

  committed
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• linking threadpools

  

  Nathan Roach

  committed
  51a1df1

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• code style cleanup, etc

  

  Nathan Roach

  committed
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Commits on Nov 19, 2020

• Adding proc for correcting alignments based on the corresponding reference genome regions

  

  Nathan Roach

  committed
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• more moving code around, cleaning up dead code, etc

  

  Nathan Roach

  committed
  83f9a93

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• removing a bunch of dead / commented code blocks, beginning the process of navigating other code to other, more meaningful, file names

  

  Nathan Roach

  committed
  2ce8106

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Commits on Nov 15, 2020

• Adding outputting of clusters in FASTA format

  

  Nathan Roach

  committed
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Commits on Nov 14, 2020

• Adding kde calculation for determining splice sites locations

  

  Nathan Roach

  committed
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