.artenolis.yml

language: bash

before_install:
    - if [[ -a .git/shallow ]]; then git fetch --unshallow; fi

script:
    # set the environment variable CURRENT_DIR
    - CURRENT_DIR=`pwd`

    # change to the current directory
    - cd $CURRENT_DIR

    # launch the tests
    - bash .artenolis/runtests.sh

after_success:
    - if [ "$MATLAB_VER" == "R2017b" ]; then
      if [ "$ARCH" == "Linux" ]; then
      bash <(curl -s https://codecov.io/bash) -f "!*.lst";
      export PATH="/home/sbg-jenkins/.local/bin":$PATH;
      pip install --upgrade --user -r docs/requirements.txt;
      python ~/github_stats.py $(pwd)/docs/source/list_contributors.rst;
      ssh sbg-jenkins@10.184.148.14 'cd /Users/sbg-jenkins/jenkins/workspace/COBRAToolbox-branches-auto-macOS/MATLAB_VER/R2017b/label/macOS-biocore && ./docs/prepareTutorials.sh -c=/Users/sbg-jenkins/jenkins/workspace/COBRAToolbox-branches-auto-macOS/MATLAB_VER/R2017b/label/macOS-biocore -t=/Users/sbg-jenkins/jenkins/workspace/COBRAToolbox-branches-auto-macOS/MATLAB_VER/R2017b/label/macOS-biocore/tutorials -p=/Users/sbg-jenkins/tmp -m=html,pdf,png'
      python -c "from documenter.deploy import Documentation; doc = Documentation('github.com/opencobra/cobratoolbox', local_upstream='$(pwd)', ci='jenkins'); doc.deploy()";
      bash .artenolis/generateZip.sh;
      fi
      fi