JGLOBAL_WAVE_INIT

#! /usr/bin/env bash

source "$HOMEgfs/ush/preamble.sh"

export RUN_ENVIR=${RUN_ENVIR:-"nco"}

#############################
# Source relevant config files
#############################
configs="base wave waveinit"
export EXPDIR=${EXPDIR:-$HOMEgfs/parm/config}
config_path=${EXPDIR:-$NWROOT/gfs.${gfs_ver}/parm/config}
for config in $configs; do
    . $config_path/config.$config
    status=$?
    [[ $status -ne 0 ]] && exit $status
done

##########################################
# Source machine runtime environment
##########################################
. $HOMEgfs/env/${machine}.env waveinit
status=$?
[[ $status -ne 0 ]] && exit $status

# PATH for working directory
export NET=${NET:-gfs}
export RUN=${RUN:-gfs}
export COMPONENT=${COMPONENT:-wave}

# Add default errchk = err_chk
export errchk=${errchk:-err_chk}

# Create and go to DATA directory
export DATA=${DATA:-${DATAROOT:?}/${jobid}}
mkdir -p $DATA
cd $DATA

cyc=${cyc:-00}
export cycle=${cycle:-t${cyc}z}
 
# Set PDY
setpdy.sh
. PDY

export pgmout=OUTPUT.$$

export MP_PULSE=0

# Path to HOME Directory
export FIXwave=${FIXwave:-$HOMEgfs/fix/fix_wave_${NET}}
export PARMwave=${PARMwave:-$HOMEgfs/parm/wave}
export USHwave=${USHwave:-$HOMEgfs/ush}
export EXECwave=${EXECwave:-$HOMEgfs/exec}

# Set COM Paths and GETGES environment
if [ $RUN_ENVIR = "nco" ]; then
    export ROTDIR=${COMROOT:?}/$NET/$envir
fi
export COMIN=${COMIN:-${ROTDIR}/${CDUMP}.${PDY}/${cyc}/$COMPONENT}
export COMOUT=${COMOUT:-${ROTDIR}/${CDUMP}.${PDY}/${cyc}/$COMPONENT}
[[ ! -d $COMOUT ]] && mkdir -m 775 -p $COMOUT

if [ $SENDCOM = YES ]; then
  mkdir -p $COMOUT/rundata
fi

# Set mpi serial command
export wavempexec=${launcher:-"mpirun -n"}
export wave_mpmd=${mpmd:-"cfp"}

# Execute the Script  
$HOMEgfs/scripts/exgfs_wave_init.sh

##########################################
# Remove the Temporary working directory
##########################################
cd $DATAROOT
[[ $KEEPDATA = "NO" ]] && rm -rf $DATA


exit 0