Below are some toy examples of input files to some of the handlers.
| File | Handler | Use |
|---|---|---|
toy_Barley_Morex_v2_18Mb_regions.intervals |
Any handler that uses GATK | Custom list of intervals for barley |
toy_Gmax_275_v2.0_scaffolds.intervals |
Any handler that uses GATK | Custom list of scaffolds for soybean |