Skip to content

Issues: Martinsos/opal

New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

19 Open 11 Closed
19 Open 11 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Segmentation fault for certain gap open / gap extension configuration
#33 opened Jul 26, 2023 by michal-kierzynka
Add E-value
#31 opened Aug 16, 2016 by Martinsos
no member named 'abs' in namespace 'std';
#30 opened Aug 5, 2016 by FadelBerakdar
1
Add SHW mode
#29 opened Sep 17, 2015 by Martinsos
When gap open is smaller then gap extend, stuff breaks bug
#28 opened Sep 17, 2015 by Martinsos
Add flag for turning off overflow check enhancement
#27 opened Jun 29, 2015 by Martinsos 1.0.0
@Martinsos
Alignment of data for SSE/AVX does not seem to matter medium priority
#25 opened May 10, 2015 by Martinsos
@Martinsos
Improve speed of basic search enhancement high priority killer feature
#23 opened Mar 30, 2015 by Martinsos
@Martinsos
4
Create example of usage enhancement low priority
#21 opened Jan 15, 2015 by Martinsos
Update README! bug high priority
#20 opened Jan 15, 2015 by Martinsos
Split swimd.cpp into more files enhancement low priority
#19 opened Jan 13, 2015 by Martinsos
Limit memory usage of alignment enhancement high priority
#18 opened Jan 13, 2015 by Martinsos 1.0.0
@Martinsos
Improve alignment speed enhancement high priority
#17 opened Jan 13, 2015 by Martinsos 1.0.0
@Martinsos
3
Consider using swimd to solve 1:1 for large targets enhancement killer feature low priority
#16 opened Jan 12, 2015 by Martinsos
calculate hits for all query sequences of a multiple fasta file enhancement low priority
#9 opened Jul 29, 2014 by tolot27
1
make command line parameters compatible to blast/swipe bug enhancement medium priority
#6 opened Jul 9, 2014 by tolot27
2
Add callback function that is called after sequence is calculated enhancement low priority
#5 opened Jul 1, 2014 by Martinsos
Write better tests medium priority
#4 opened Jun 24, 2014 by Martinsos
Process multiple cells in one iteration, add padding to database sequences, optimize for cache enhancement low priority
#3 opened Jun 13, 2014 by Martinsos
3
ProTip! Type g i on any issue or pull request to go back to the issue listing page.