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Individual-based modeling to study polyploid establishment

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PolyStab

Notebooks:

  • scaling_phenotype.jl: More in depth look at phenotype scaler
  • AM.jl: Single deme simulations with assortative mating and/or selfing
  • Env_stoch.jl: Changing environment through time in a single deme
  • gen_var.jl: Simulations of genetic variance in a single deme and different genotype to phenotype maps
  • FToNS.jl: Testing some different model parameters in a single deme
  • fixedpop.jl: Selection/Truncsel with constant popsize
  • (Griswold.jl: Try migration scenario from Grisowld with quantitative genetics model)
  • habitat2D.jl: Preliminary simulations in 2D habitat
  • island.jl: Implementation of island migration model
  • island_estab_sims.jl: Simulations for polyploid establishment with island migration
  • linhab_gifs.jl: PnB type simulations with mixed ploidy populations
  • model_with_migration.jl: Original PnB simulations with haploid population
  • truncation_selection.jl: Some experiments with truncation selection in different scenarios
  • unreduced_gametes.jl: Simulations for polyploid establishment in a single deme

Old code (might still contain some notes):

  • matrix.jl
  • migration_gifs.jl
  • mixed_ploidy.jl
  • single_deme_selection.jl
  • single_deme.jl

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