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Pull requests: MIC-DKFZ/nnUNet

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Pull requests list

fix: resolve silent freeze and progress bar issues in preprocessing pipeline on Windows
#2993 opened Feb 27, 2026 by VAIDEHI-28 Loading…
1
@FabianIsensee
5
se res block
#2990 opened Feb 24, 2026 by NicolasDGP Loading…
@FabianIsensee
1
add MkDocs configuration and build workflow for documentation
#2957 opened Nov 30, 2025 by Borda Loading…
@FabianIsensee
2
add pre-commit config with standard hooks, Ruff, and codespell
#2956 opened Nov 30, 2025 by Borda Loading…
@FabianIsensee
2
Feat/gpu augmentations
#2944 opened Nov 18, 2025 by etienne87 Loading…
@FabianIsensee
Allow passing kwargs to image reader/writer
#2939 opened Nov 12, 2025 by GFabien Loading…
@FabianIsensee
1
Fix: calculate num_iterations_per_epoch dynamically in nnUNetTrainer
#2928 opened Oct 24, 2025 by mohamedbassem6 Loading…
@FabianIsensee
FIX: print logs when training early end due to an exception when training with nnUNetTrainerBenchmark_5epochs and nnUNetTrainerBenchmark_5epochs_noDataLoading
#2926 opened Oct 24, 2025 by Leirbag-gabrieL Loading…
@FabianIsensee
1
Fix for "One or more background workers are no longer alive. Exiting" errors
#2910 opened Sep 23, 2025 by MikeUU332 Loading…
@FabianIsensee
add possibility for external nnUNet trainers
#2890 opened Aug 13, 2025 by sten2lu Loading…
@FabianIsensee
1
Fix Windows CI
#2886 opened Aug 8, 2025 by dyollb Loading…
@FabianIsensee
Remove forced HTTP 1.0 for model download
#2879 opened Jul 27, 2025 by ASHISRAVINDRAN Loading…
@FabianIsensee
Determinism implementation in nnunet
#2871 opened Jul 18, 2025 by Luugaaa Loading…
@FabianIsensee
1
Update how_to_use_nnunet.md
#2864 opened Jul 15, 2025 by labode Loading…
@FabianIsensee
Fixing a bug in predict_from_files_sequential for 3d_cascaded_fullres models
#2862 opened Jul 15, 2025 by helrewaidy Loading…
@FabianIsensee
Initialize predictor from individual path
#2861 opened Jul 14, 2025 by MattTheCuber Loading…
@FabianIsensee
fix copying dataset.json to output_folder in ensemble_folders function
#2857 opened Jul 7, 2025 by hxviet Loading…
@FabianIsensee
Nn u net fredrik
#2848 opened Jun 27, 2025 by OlofssonFredrik Loading…
@FabianIsensee
2
CLI Catalog
#2834 opened Jun 5, 2025 by vmiller987 Loading…
@FabianIsensee
1
Fixed a bug in preprocessing in crop_to_nonzero. #2796
#2824 opened May 26, 2025 by kreininmv Loading…
@FabianIsensee
2
adding focal loss, distance map dice loss, loading distance maps
#2630 opened Dec 2, 2024 by andy-s-ding Loading…
@FabianIsensee
2
Use real latest checkpoint in training
#2564 opened Oct 22, 2024 by fitzjalen Loading…
@FabianIsensee
2
Fast inference for large files with several classes #2540
#2545 opened Oct 11, 2024 by pooya-mohammadi Loading…
@FabianIsensee
1
Implement TTA Batch Processing to Improve Inference Speed
#2153 opened May 2, 2024 by PengchengShi1220 Loading…
@FabianIsensee
2
Enable user to specify torch device in run_training
#1943 opened Feb 10, 2024 by bdzyubak Loading…
@FabianIsensee
1
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