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Merge pull request #48 from MAAP-Project/add-devcontainer-configuration
initial config for dev container - requires manual pip install
2 parents ec937f0 + cd25034 commit 334f3de

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‎.devcontainer/Dockerfile

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FROM mcr.microsoft.com/devcontainers/miniconda:0-3
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# Copy environment.yml (if found) to a temp location so we update the environment. Also
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# copy "noop.txt" so the COPY instruction does not fail if no environment.yml exists.
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USER root
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COPY environment.yml* .devcontainer/noop.txt /tmp/conda-tmp/
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RUN if [ -f "/tmp/conda-tmp/environment.yml" ]; then umask 0002 && /opt/conda/bin/conda env update -n base -f /tmp/conda-tmp/environment.yml; fi \
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&& rm -rf /tmp/conda-tmp
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USER vscode
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# WORKDIR /tmp/stac_ipyleaflet
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# COPY . .
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# RUN /opt/conda/bin/pip install -e .
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# [Optional] Uncomment to install a different version of Python than the default
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# RUN conda install -y python=3.6 \
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# && pip install --no-cache-dir pipx \
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# && pipx reinstall-all
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# [Optional] Uncomment this section to install additional OS packages.
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# RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
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# && apt-get -y install --no-install-recommends <your-package-list-here>
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‎.devcontainer/devcontainer.json

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// For format details, see https://aka.ms/devcontainer.json. For config options, see the
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// README at: https://github.com/devcontainers/templates/tree/main/src/miniconda
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{
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"name": "Miniconda (Python 3)",
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"build": {
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"context": "..",
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"dockerfile": "Dockerfile"
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},
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"features": {
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"ghcr.io/devcontainers/features/node:1": {}
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}
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// Features to add to the dev container. More info: https://containers.dev/features.
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// "features": {},
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// Use 'forwardPorts' to make a list of ports inside the container available locally.
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// "forwardPorts": [],
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// Use 'postCreateCommand' to run commands after the container is created.
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//"postCreateCommand": "pip install -e ."
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//"postCreateCommand": "conda init bash"
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// Configure tool-specific properties.
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// "customizations": {},
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// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
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// "remoteUser": "root"
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}

‎.devcontainer/noop.txt

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This file is copied into the container along with environment.yml* from the
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parent folder. This is done to prevent the Dockerfile COPY instruction from
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failing if no environment.yml is found.

‎demo.ipynb

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"execution_count": 1,
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"id": "4f7d5321-d82b-4ed4-8136-832f932b30b5",
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"metadata": {},
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"outputs": [],
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"outputs": [
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{
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"ename": "ImportError",
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"evalue": "libpoppler.so.126: cannot open shared object file: No such file or directory",
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"output_type": "error",
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"traceback": [
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"\u001b[0;31m---------------------------------------------------------------------------\u001b[0m",
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"\u001b[0;31mImportError\u001b[0m Traceback (most recent call last)",
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"Cell \u001b[0;32mIn[1], line 1\u001b[0m\n\u001b[0;32m----> 1\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mstac_ipyleaflet\u001b[39;00m\n",
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"File \u001b[0;32m/workspaces/stac_ipyleaflet/stac_ipyleaflet/__init__.py:7\u001b[0m\n\u001b[1;32m 4\u001b[0m __email__ \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124maimee@developmentseed.org\u001b[39m\u001b[38;5;124m'\u001b[39m\n\u001b[1;32m 5\u001b[0m __version__ \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m'\u001b[39m\u001b[38;5;124m0.1.0\u001b[39m\u001b[38;5;124m'\u001b[39m\n\u001b[0;32m----> 7\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mcore\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;241m*\u001b[39m\n",
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"File \u001b[0;32m/workspaces/stac_ipyleaflet/stac_ipyleaflet/core.py:15\u001b[0m\n\u001b[1;32m 13\u001b[0m \u001b[38;5;66;03m#from pydantic import BaseModel\u001b[39;00m\n\u001b[1;32m 14\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mshapely\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mgeometry\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Polygon\n\u001b[0;32m---> 15\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrioxarray\u001b[39;00m\n\u001b[1;32m 16\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mxarray\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m \u001b[38;5;21;01mxr\u001b[39;00m\n\u001b[1;32m 17\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mnumpy\u001b[39;00m\n",
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"File \u001b[0;32m/opt/conda/lib/python3.10/site-packages/rioxarray/__init__.py:5\u001b[0m\n\u001b[1;32m 2\u001b[0m __author__ \u001b[38;5;241m=\u001b[39m \u001b[38;5;124m\"\"\"\u001b[39m\u001b[38;5;124mrioxarray Contributors\u001b[39m\u001b[38;5;124m\"\"\"\u001b[39m\n\u001b[1;32m 3\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mimportlib\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mmetadata\u001b[39;00m\n\u001b[0;32m----> 5\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrioxarray\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mraster_array\u001b[39;00m \u001b[38;5;66;03m# noqa\u001b[39;00m\n\u001b[1;32m 6\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrioxarray\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mraster_dataset\u001b[39;00m \u001b[38;5;66;03m# noqa\u001b[39;00m\n\u001b[1;32m 7\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mrioxarray\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01m_io\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m open_rasterio \u001b[38;5;66;03m# noqa\u001b[39;00m\n",
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"File \u001b[0;32m/opt/conda/lib/python3.10/site-packages/rioxarray/raster_array.py:19\u001b[0m\n\u001b[1;32m 16\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mtyping\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m Any, Literal, Optional, Union\n\u001b[1;32m 18\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mnumpy\u001b[39;00m \u001b[38;5;28;01mas\u001b[39;00m \u001b[38;5;21;01mnp\u001b[39;00m\n\u001b[0;32m---> 19\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\n\u001b[1;32m 20\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mmask\u001b[39;00m\n\u001b[1;32m 21\u001b[0m \u001b[38;5;28;01mimport\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mwarp\u001b[39;00m\n",
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"File \u001b[0;32m/opt/conda/lib/python3.10/site-packages/rasterio/__init__.py:28\u001b[0m\n\u001b[1;32m 24\u001b[0m os\u001b[38;5;241m.\u001b[39madd_dll_directory(os\u001b[38;5;241m.\u001b[39mpath\u001b[38;5;241m.\u001b[39mabspath(p))\n\u001b[1;32m 27\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01m_show_versions\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m show_versions\n\u001b[0;32m---> 28\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01m_version\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m gdal_version, get_geos_version, get_proj_version\n\u001b[1;32m 29\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mcrs\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m CRS\n\u001b[1;32m 30\u001b[0m \u001b[38;5;28;01mfrom\u001b[39;00m \u001b[38;5;21;01mrasterio\u001b[39;00m\u001b[38;5;21;01m.\u001b[39;00m\u001b[38;5;21;01mdrivers\u001b[39;00m \u001b[38;5;28;01mimport\u001b[39;00m driver_from_extension, is_blacklisted\n",
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"\u001b[0;31mImportError\u001b[0m: libpoppler.so.126: cannot open shared object file: No such file or directory"
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]
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}
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],
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"source": [
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"import stac_ipyleaflet"
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]
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],
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"metadata": {
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"kernelspec": {
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"display_name": "stac_ipyleaflet",
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"display_name": "Python 3 (ipykernel)",
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"language": "python",
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"name": "stac_ipyleaflet"
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"name": "python3"
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},
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"language_info": {
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"codemirror_mode": {
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"name": "python",
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"nbconvert_exporter": "python",
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"pygments_lexer": "ipython3",
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"version": "3.9.15"
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"version": "3.10.8"
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}
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},
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"nbformat": 4,

‎environment.yml

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name: stac_ipyleaflet
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channels:
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- conda-forge
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dependencies:
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- jupyterlab
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- pip
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- gdal
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- rasterio>=1.3

‎setup.cfg

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[metadata]
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name = stac_ipyleaflet
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version=0.1.0
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author = Aimee Barciauskas
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description=ipyleaflet customized for discovering, visualizing and interacting with STAC and workspace data.
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long_description = file: README.md
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url = https://github.com/abarciauskas-bgse/stac_ipyleaflet
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keywords = stac_ipyleaflet
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author_email=aimee@developmentseed.org
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license=MIT license
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classifiers =
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Development Status :: 2 - Pre-Alpha
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Intended Audience :: Developers
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License :: OSI Approved :: MIT License
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Natural Language :: English
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Programming Language :: Python :: 3.8
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Programming Language :: Python :: 3.9
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Programming Language :: Python :: 3.10
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[bumpversion]
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current_version = 0.1.0
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commit = True
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exclude = docs
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[tool:pytest]
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collect_ignore = ['setup.py']
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[options]
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packages = find:
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include_package_data=True
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zip_safe=False
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tests_require=[pytest>=3]
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install_requires =
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ipyleaflet==0.17.2
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ipywidgets==8.0.4
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ipyevents
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matplotlib
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pydantic
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shapely
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rasterio
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requests
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rio_tiler
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rioxarray
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xarray
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pystac_client==0.6.1
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[options.extras_require]
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test =
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pytest
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[options.packages.find]
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where = stac_ipyleaflet
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‎setup.py

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"""The setup script."""
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from setuptools import setup, find_packages
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from setuptools import setup
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with open('README.rst') as readme_file:
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readme = readme_file.read()
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with open('HISTORY.rst') as history_file:
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history = history_file.read()
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requirements = [ ]
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test_requirements = ['pytest>=3', ]
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setup(
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author="Aimee Barciauskas",
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author_email='aimee@developmentseed.org',
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python_requires='>=3.6',
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classifiers=[
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'Development Status :: 2 - Pre-Alpha',
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'Intended Audience :: Developers',
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'License :: OSI Approved :: MIT License',
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'Natural Language :: English',
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'Programming Language :: Python :: 3',
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'Programming Language :: Python :: 3.6',
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'Programming Language :: Python :: 3.7',
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'Programming Language :: Python :: 3.8',
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],
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description="ipyleaflet customized for discovering, visualizing and interacting with STAC and workspace data.",
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install_requires=requirements,
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license="MIT license",
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long_description=readme + '\n\n' + history,
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include_package_data=True,
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keywords='stac_ipyleaflet',
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name='stac_ipyleaflet',
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packages=find_packages(include=['stac_ipyleaflet', 'stac_ipyleaflet.*']),
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test_suite='tests',
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tests_require=test_requirements,
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url='https://github.com/abarciauskas-bgse/stac_ipyleaflet',
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version='0.1.0',
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zip_safe=False,
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)
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if __name__ == "__main__":
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setup()

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