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actions-user committed Oct 6, 2024
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3 changes: 2 additions & 1 deletion notebooks/00_Setup.ipynb
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"For local use, download and install ...\n",
"\n",
"1. [Python 3.9](https://wiki.python.org/moin/BeginnersGuide/Download).\n",
"2. [mamba](https://mamba.readthedocs.io/en/latest/installation.html) as a\n",
"2. [mamba](https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html)\n",
" as a\n",
" replacement for conda. Spyglass installation is significantly faster with\n",
" mamba.\n",
" ```bash\n",
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4 changes: 2 additions & 2 deletions notebooks/01_Concepts.ipynb
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"source": [
"## Other materials\n",
"\n",
"DataJoint is an \"Object-relational mapping\" tool, which means that it gives us\n",
"a Python object for tables that exist on a shared SQL server. Many Spyglass\n",
"DataJoint is an tool that helps us create Python classes for\n",
"tables that exist on a shared SQL server. Many Spyglass\n",
"imports are DataJoint tables like this.\n",
"\n",
"Any 'introduction to SQL' will give an overview of relational data models as\n",
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2 changes: 1 addition & 1 deletion notebooks/README.md
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Expand Up @@ -28,7 +28,7 @@ spike sorting to optional manual curation of the output of the automated
sorting.

Spikesorting results from any pipeline can then be organized and tracked using
tools in [Spikesorting Analysis](./11_Spikesorting_Analysis.ipynb).
tools in [Spikesorting Analysis](./11_Spike_Sorting_Analysis.ipynb).

## 2. Position Pipeline

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3 changes: 2 additions & 1 deletion notebooks/py_scripts/00_Setup.py
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# For local use, download and install ...
#
# 1. [Python 3.9](https://wiki.python.org/moin/BeginnersGuide/Download).
# 2. [mamba](https://mamba.readthedocs.io/en/latest/installation.html) as a
# 2. [mamba](https://mamba.readthedocs.io/en/latest/installation/mamba-installation.html)
# as a
# replacement for conda. Spyglass installation is significantly faster with
# mamba.
# ```bash
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4 changes: 2 additions & 2 deletions notebooks/py_scripts/01_Concepts.py
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# ## Other materials
#
# DataJoint is an "Object-relational mapping" tool, which means that it gives us
# a Python object for tables that exist on a shared SQL server. Many Spyglass
# DataJoint is an tool that helps us create Python classes for
# tables that exist on a shared SQL server. Many Spyglass
# imports are DataJoint tables like this.
#
# Any 'introduction to SQL' will give an overview of relational data models as
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