Commits

Commits on Jan 7, 2024

added note about the new internal (JHPCE) location
gpertea
authored

Commits on Nov 13, 2023

Add PCs objects for DLPFC and HPC (HIPPO)
lcolladotor
committed

Commits on Jun 3, 2022

Fix rownames in the unclean txt files
lcolladotor
committed

Commits on May 17, 2022

Commits on Apr 16, 2021

Commits on Mar 24, 2021

Commits on Mar 12, 2021

Add script for merging results and re-using some of the code from https://github.com/LieberInstitute/brainseq_phase2/blob/master/browser/extract_data.R and https://github.com/LieberInstitute/brains…
lcolladotor
committed
Adapt the interaction eQTL code to the subset of SNPs for Hancock et al
lcolladotor
committed
Copy https://github.com/LieberInstitute/brainseq_phase2/blob/master/eQTL_full/run_eqtls_interaction.R
lcolladotor
committed
Update to match DLPFC new code
lcolladotor
committed
Copy https://github.com/LieberInstitute/brainseq_phase2/blob/master/eQTL_full/run_eqtls_hippo.R
lcolladotor
committed
Adapt DLPFC eQTL code for the subset of SNPs for Hancock et al
lcolladotor
committed
Copy https://github.com/LieberInstitute/brainseq_phase2/blob/master/eQTL_full/run_eqtls_dlpfc.R
lcolladotor
committed
Subset snps of interest for Hancock et al
lcolladotor
committed
Save earlier modifications
lcolladotor
committed

Commits on May 14, 2020

Add the feature_id column to the stats tables to make it easier to match the stats with the annotations and other tables. Fix the rownames for the stats sczd tables (particularly the exon ones were…
lcolladotor
committed

Commits on May 5, 2020

Commits on Apr 15, 2020

Re-format code, example for JHPCE + GitHub setup and practice session
lcolladotor
committed

Commits on Dec 13, 2019

Commits on Nov 1, 2019

Add twas z plot, gene-only
lcolladotor
committed

Commits on Oct 25, 2019

Check 2 more ligases
lcolladotor
committed