Name		Name	Last commit message	Last commit date
parent directory ..
.DS_Store		.DS_Store
A.gambiae.hmm		A.gambiae.hmm
A.mellifera.hmm		A.mellifera.hmm
A.thaliana.hmm		A.thaliana.hmm
Acanium.hmm		Acanium.hmm
At.hmm		At.hmm
B.malayi.hmm		B.malayi.hmm
B.mori.hmm		B.mori.hmm
C.elegans.hmm		C.elegans.hmm
C.intestinalis.hmm		C.intestinalis.hmm
Ce.hmm		Ce.hmm
D.melanogaster.hmm		D.melanogaster.hmm
Dm.hmm		Dm.hmm
Nasonia.hmm		Nasonia.hmm
O.sativa.hmm		O.sativa.hmm
Os.hmm		Os.hmm
README.md		README.md
brugia		brugia
ciona		ciona
fly		fly
ixodesA.hmm		ixodesA.hmm
ixodesB.hmm		ixodesB.hmm
mam39-ro.hmm		mam39-ro.hmm
mam39.hmm		mam39.hmm
mam46-ro.hmm		mam46-ro.hmm
mam46.hmm		mam46.hmm
mam54-ro.hmm		mam54-ro.hmm
mam54.hmm		mam54.hmm
mamiso.hmm		mamiso.hmm
minimal.hmm		minimal.hmm
mosquito		mosquito
nGASP.hmm		nGASP.hmm
nGASPr.hmm		nGASPr.hmm
rice		rice
thale		thale
worm		worm
worm1.hmm		worm1.hmm

README.md

README for HMM directory

These files can be loaded without explicit path if the $ZOE environment variable has been set to the Zoe directory.

In the case that there is more than one HMM for a particular species, the HMMs are a little different...