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1.6.0-DEV-0669b64613.log
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Julia Version 1.6.0-DEV.1153
Commit 0669b64613 (2020-10-07 09:01 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SortingAlgorithms ─────────── v0.3.1
Installed Compat ────────────────────── v3.18.0
Installed DataAPI ───────────────────── v1.3.0
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Tables ────────────────────── v1.1.0
Installed CategoricalArrays ─────────── v0.8.3
Installed DataFrames ────────────────── v0.21.7
Installed Reexport ──────────────────── v0.2.0
Installed OrderedCollections ────────── v1.3.1
Installed JSON ──────────────────────── v0.21.1
Installed Parsers ───────────────────── v1.0.11
Installed PooledArrays ──────────────── v0.5.3
Installed Missings ──────────────────── v0.4.4
Installed DataValueInterfaces ───────── v1.0.0
Installed DataStructures ────────────── v0.18.7
Installed TableTraits ───────────────── v1.0.0
Installed InvertedIndices ───────────── v1.0.0
Installed StructTypes ───────────────── v1.1.0
Installed uCSV ──────────────────────── v0.1.3
Updating `~/.julia/environments/v1.6/Project.toml`
[e0b4c2ea] + uCSV v0.1.3
Updating `~/.julia/environments/v1.6/Manifest.toml`
[324d7699] + CategoricalArrays v0.8.3
[34da2185] + Compat v3.18.0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.7
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[e1d29d7a] + Missings v0.4.4
[bac558e1] + OrderedCollections v1.3.1
[69de0a69] + Parsers v1.0.11
[2dfb63ee] + PooledArrays v0.5.3
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[e0b4c2ea] + uCSV v0.1.3
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
┌ Warning: using test/REQUIRE files is deprecated and current support is lacking in some areas
└ @ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1505
Testing uCSV
Status `/tmp/jl_oAZ56Z/Project.toml`
[324d7699] CategoricalArrays v0.8.3
[944b1d66] CodecZlib v0.7.0
[a93c6f00] DataFrames v0.21.7
[cd3eb016] HTTP v0.8.19
[ce6b1742] RDatasets v0.6.10
[e0b4c2ea] uCSV v0.1.3
[ade2ca70] Dates
[44cfe95a] Pkg
[8dfed614] Test
Status `/tmp/jl_oAZ56Z/Manifest.toml`
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.3
[944b1d66] CodecZlib v0.7.0
[34da2185] Compat v3.18.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.7
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[e2ba6199] ExprTools v0.1.2
[8f5d6c58] EzXML v1.1.0
[5789e2e9] FileIO v1.4.3
[cd3eb016] HTTP v0.8.19
[83e8ac13] IniFile v0.5.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[94ce4f54] Libiconv_jll v1.16.0+6
[739be429] MbedTLS v1.0.2
[c8ffd9c3] MbedTLS_jll v2.16.8+0
[e1d29d7a] Missings v0.4.4
[78c3b35d] Mocking v0.7.1
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.11
[2dfb63ee] PooledArrays v0.5.3
[df47a6cb] RData v0.7.2
[ce6b1742] RDatasets v0.6.10
[3cdcf5f2] RecipesBase v1.1.0
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.1.0
[91c51154] SentinelArrays v1.2.16
[a2af1166] SortingAlgorithms v0.3.1
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[f269a46b] TimeZones v1.4.0
[3bb67fe8] TranscodingStreams v0.9.5
[02c8fc9c] XML2_jll v2.9.10+2
[83775a58] Zlib_jll v1.2.11+16
[e0b4c2ea] uCSV v0.1.3
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
Float64 Matrix: Error During Test at /home/pkgeval/.julia/packages/uCSV/pjRwL/test/runtests.jl:13
Got exception outside of a @test
Error parsing field "2.0" in row 2, column 1.
Unable to parse field "2.0" as type Float64
Possible fixes may include:
1. set `typedetectrows` to a value >= 2
2. manually specify the element-type of column 1 via the `types` argument
3. manually specify a parser for column 1 via the `parsers` argument
4. if the intended value is missing or another special encoding, setting the `encodings` argument appropriately.
Stacktrace:
[1] throwbadconversion(f::SubString{String}, currentline::Int64, i::Int64, encodings::Dict{String, Any}, data::Vector{Vector{Float64}})
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/helperfunctions.jl:141
[2] parsesource(source::IOBuffer, delim::Char, quotes::Missing, escape::Missing, comment::Missing, encodings::Dict{String, Any}, header::Int64, skiprows::Vector{Int64}, types::Dict{Int64, DataType}, allowmissing::Dict{Int64, Bool}, coltypes::Type, colparsers::Dict{Int64, Function}, typeparsers::Dict{DataType, Function}, typedetectrows::Int64, skipmalformed::Bool, trimwhitespace::Bool)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/parsesource.jl:230
[3] read(source::IOBuffer; delim::Char, quotes::Missing, escape::Missing, comment::Missing, encodings::Dict{String, Any}, header::Int64, skiprows::Vector{Int64}, types::Dict{Int64, DataType}, allowmissing::Dict{Int64, Bool}, coltypes::Type{Vector{T} where T}, colparsers::Dict{Int64, Function}, typeparsers::Dict{DataType, Function}, typedetectrows::Int64, skipmalformed::Bool, trimwhitespace::Bool)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/read.jl:217
[4] read(source::IOBuffer)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/read.jl:200
[5] top-level scope
@ ~/.julia/packages/uCSV/pjRwL/test/runtests.jl:20
[6] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1144
[7] top-level scope
@ ~/.julia/packages/uCSV/pjRwL/test/runtests.jl:14
[8] include(fname::String)
@ Base.MainInclude ./client.jl:444
[9] top-level scope
@ none:6
[10] eval(m::Module, e::Any)
@ Core ./boot.jl:360
[11] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:261
[12] _start()
@ Base ./client.jl:485
caused by: MethodError: no method matching typesubtract(::Type{Float64}, ::Type{Missing})
Closest candidates are:
typesubtract(::Any, ::Any, !Matched::Int64) at compiler/typeutils.jl:66
Stacktrace:
[1] (::uCSV.var"#29#44"{Dict{DataType, Function}, DataType})(x::SubString{String})
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/parsesource.jl:193
[2] parsesource(source::IOBuffer, delim::Char, quotes::Missing, escape::Missing, comment::Missing, encodings::Dict{String, Any}, header::Int64, skiprows::Vector{Int64}, types::Dict{Int64, DataType}, allowmissing::Dict{Int64, Bool}, coltypes::Type, colparsers::Dict{Int64, Function}, typeparsers::Dict{DataType, Function}, typedetectrows::Int64, skipmalformed::Bool, trimwhitespace::Bool)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/parsesource.jl:227
[3] read(source::IOBuffer; delim::Char, quotes::Missing, escape::Missing, comment::Missing, encodings::Dict{String, Any}, header::Int64, skiprows::Vector{Int64}, types::Dict{Int64, DataType}, allowmissing::Dict{Int64, Bool}, coltypes::Type{Vector{T} where T}, colparsers::Dict{Int64, Function}, typeparsers::Dict{DataType, Function}, typedetectrows::Int64, skipmalformed::Bool, trimwhitespace::Bool)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/read.jl:217
[4] read(source::IOBuffer)
@ uCSV ~/.julia/packages/uCSV/pjRwL/src/read.jl:200
[5] top-level scope
@ ~/.julia/packages/uCSV/pjRwL/test/runtests.jl:20
[6] top-level scope
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1144
[7] top-level scope
@ ~/.julia/packages/uCSV/pjRwL/test/runtests.jl:14
[8] include(fname::String)
@ Base.MainInclude ./client.jl:444
[9] top-level scope
@ none:6
[10] eval(m::Module, e::Any)
@ Core ./boot.jl:360
[11] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:261
[12] _start()
@ Base ./client.jl:485
Test Summary: | Error Total
Float64 Matrix | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/uCSV/pjRwL/test/runtests.jl:13
ERROR: Package uCSV errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /workspace/srcdir/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19