-
Notifications
You must be signed in to change notification settings - Fork 5
/
1.6.0-DEV-0669b64613.log
370 lines (369 loc) · 16.2 KB
/
1.6.0-DEV-0669b64613.log
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
Julia Version 1.6.0-DEV.1153
Commit 0669b64613 (2020-10-07 09:01 UTC)
Platform Info:
OS: Linux (x86_64-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed SortingAlgorithms ──────────── v0.3.1
Installed MultiModalMuSig ────────────── v0.1.0
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed Compat ─────────────────────── v3.18.0
Installed DataAPI ────────────────────── v1.3.0
Installed Tables ─────────────────────── v1.1.0
Installed MathProgBase ───────────────── v0.7.8
Installed DataFrames ─────────────────── v0.21.7
Installed IteratorInterfaceExtensions ── v1.0.0
Installed Reexport ───────────────────── v0.2.0
Installed OrderedCollections ─────────── v1.3.1
Installed CategoricalArrays ──────────── v0.8.3
Installed PooledArrays ───────────────── v0.5.3
Installed Missings ───────────────────── v0.4.4
Installed DataStructures ─────────────── v0.18.7
Installed SpecialFunctions ───────────── v0.10.3
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed NLopt ──────────────────────── v0.6.0
Installed Parsers ────────────────────── v1.0.11
Installed JSON ───────────────────────── v0.21.1
Installed DataValueInterfaces ────────── v1.0.0
Installed InvertedIndices ────────────── v1.0.0
Installed StructTypes ────────────────── v1.1.0
Installed NLopt_jll ──────────────────── v2.6.2+0
Installed TableTraits ────────────────── v1.0.0
Updating `~/.julia/environments/v1.6/Project.toml`
[a66acb62] + MultiModalMuSig v0.1.0
Updating `~/.julia/environments/v1.6/Manifest.toml`
[324d7699] + CategoricalArrays v0.8.3
[34da2185] + Compat v3.18.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.7
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[fdba3010] + MathProgBase v0.7.8
[e1d29d7a] + Missings v0.4.4
[a66acb62] + MultiModalMuSig v0.1.0
[76087f3c] + NLopt v0.6.0
[079eb43e] + NLopt_jll v2.6.2+0
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[bac558e1] + OrderedCollections v1.3.1
[69de0a69] + Parsers v1.0.11
[2dfb63ee] + PooledArrays v0.5.3
[189a3867] + Reexport v0.2.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing MultiModalMuSig
Status `/tmp/jl_Ak8W9Z/Project.toml`
[a93c6f00] DataFrames v0.21.7
[a66acb62] MultiModalMuSig v0.1.0
[76087f3c] NLopt v0.6.0
[276daf66] SpecialFunctions v0.10.3
[37e2e46d] LinearAlgebra
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_Ak8W9Z/Manifest.toml`
[324d7699] CategoricalArrays v0.8.3
[34da2185] Compat v3.18.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.7
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[fdba3010] MathProgBase v0.7.8
[e1d29d7a] Missings v0.4.4
[a66acb62] MultiModalMuSig v0.1.0
[76087f3c] NLopt v0.6.0
[079eb43e] NLopt_jll v2.6.2+0
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[bac558e1] OrderedCollections v1.3.1
[69de0a69] Parsers v1.0.11
[2dfb63ee] PooledArrays v0.5.3
[189a3867] Reexport v0.2.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
Test Summary: | Pass Total
constructor | 19 19
Test Summary: | Pass Total
calculate_Ndivζ | 1 1
Test Summary: | Pass Total
calculate_sumθ | 1 1
Test Summary: | Pass Total
update_λ! | 1 1
Test Summary: | Pass Total
ν_objective | 4 4
Test Summary: | Pass Total
update_ζ! | 1 1
Test Summary: | Pass Total
update_θ! | 4 4
Test Summary: | Pass Total
update_μ! | 1 1
Test Summary: | Pass Total
update_Σ! | 2 2
Test Summary: | Pass Total
update_γ! | 2 2
Test Summary: | Pass Total
update_Elnϕ! | 1 1
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:277
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:277
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:277
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:277
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = α_objective(α::Vector{Float64}, ∇α::Vector{Float64}, sum_Elnϕ::Float64, K::Int64, V::Int64) at common.jl:45
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/common.jl:45
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = α_objective(α::Vector{Float64}, ∇α::Vector{Float64}, sum_Elnϕ::Float64, K::Int64, V::Int64) at common.jl:45
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/common.jl:45
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:285
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:285
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:285
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:285
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:287
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:287
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at immctm.jl:287
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/immctm.jl:287
Test Summary: | Pass Total
update_α! | 5 5
Test Summary: |
calculate_ElnPϕ | No tests
Test Summary: |
calculate_ElnPη | No tests
Test Summary: |
calculate_ElnPZ | No tests
Test Summary: |
calculate_ElnPX | No tests
Test Summary: |
calculate_ElnQϕ | No tests
Test Summary: |
calculate_ElnQη | No tests
Test Summary: |
calculate_ElnQZ | No tests
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = logmvbeta(vals::Vector{Float64}) at common.jl:4
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/common.jl:4
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = logmvbeta(vals::Vector{Float64}) at common.jl:4
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/common.jl:4
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = logmvbeta(vals::Vector{Float64}) at common.jl:6
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/common.jl:6
Test Summary: | Pass Total
calculate_elbo | 1 1
Test Summary: | Pass Total
fit | 2 2
Test Summary: | Pass Total
loglikelihoods | 1 1
Test Summary: | Pass Total
constructor | 17 17
Test Summary: | Pass Total
calculate_Ndivζ | 1 1
Test Summary: | Pass Total
calculate_sumθ | 1 1
Test Summary: | Pass Total
λ_objective | 2 2
Test Summary: | Pass Total
ν_objective | 3 3
Test Summary: | Pass Total
update_ζ! | 1 1
Test Summary: | Pass Total
update_θ! | 4 4
Test Summary: | Pass Total
update_μ! | 1 1
Test Summary: | Pass Total
update_Σ! | 2 2
Test Summary: | Pass Total
update_γ! | 5 5
Test Summary: | Pass Total
update_Elnϕ! | 1 1
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:272
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:272
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:272
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:272
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:282
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:282
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:282
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:282
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:287
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:287
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = top-level scope at mmctm.jl:287
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/test/mmctm.jl:287
Test Summary: | Pass Total
update_α! | 4 4
Test Summary: | Pass Total
calculate_elbo | 1 1
Test Summary: | Pass Total
fit | 2 2
Test Summary: | Pass Total
loglikelihoods | 3 3
Test Summary: | Pass Total
constructor | 19 19
Test Summary: | Pass Total
update_ϕ! | 2 2
Test Summary: | Pass Total
update_γ! | 2 2
Test Summary: | Pass Total
update_λ! | 4 4
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ(model::ILDA) at ILDA.jl:135
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:135
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ(model::ILDA) at ILDA.jl:135
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:135
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ(model::ILDA) at ILDA.jl:144
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:144
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ(model::ILDA) at ILDA.jl:144
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:144
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ at ILDA.jl:144 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:144
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ at ILDA.jl:144 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/ILDA.jl:144
Test Summary: | Pass Total
calculate_elbo | 8 8
Test Summary: | Pass Total
constructor | 11 11
Test Summary: | Pass Total
update_ϕ! | 1 1
Test Summary: | Pass Total
update_γ! | 2 2
Test Summary: | Pass Total
update_λ! | 2 2
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ(model::LDA) at LDA.jl:115
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:115
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ(model::LDA) at LDA.jl:115
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:115
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ(model::LDA) at LDA.jl:121
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:121
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ(model::LDA) at LDA.jl:121
└ @ MultiModalMuSig ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:121
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = _broadcast_getindex_evalf at broadcast.jl:648 [inlined]
└ @ Core ./broadcast.jl:648
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ at LDA.jl:115 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:115
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPβ at LDA.jl:115 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:115
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ at LDA.jl:121 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:121
┌ Warning: `lgamma(x::Real)` is deprecated, use `(logabsgamma(x))[1]` instead.
│ caller = calculate_ElnPθ at LDA.jl:121 [inlined]
└ @ Core ~/.julia/packages/MultiModalMuSig/fu1uS/src/LDA.jl:121
Test Summary: | Pass Total
calculate_elbo | 8 8
Test Summary: | Pass Total
λ_objective | 2 2
Testing MultiModalMuSig tests passed