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1.6.0-DEV-7d3dac44dc.log
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Julia Version 1.6.0-DEV.1148
Commit 7d3dac44dc (2020-10-06 21:26 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed Zlib_jll ──────────────────── v1.2.11+16
Installed Blosc ─────────────────────── v0.7.0
Installed DataAPI ───────────────────── v1.3.0
Installed TranscodingStreams ────────── v0.9.5
Installed CategoricalArrays ─────────── v0.8.3
Installed StomataModels ─────────────── v0.1.0
Installed SoilPlantAirContinuum ─────── v0.1.1
Installed DataFrames ────────────────── v0.21.7
Installed WaterPhysics ──────────────── v0.1.0
Installed Mocking ───────────────────── v0.7.1
Installed SortingAlgorithms ─────────── v0.3.1
Installed Compat ────────────────────── v3.18.0
Installed CLIMAParameters ───────────── v0.1.8
Installed BufferedStreams ───────────── v1.0.0
Installed Tables ────────────────────── v1.1.0
Installed Parsers ───────────────────── v1.0.10
Installed DataValueInterfaces ───────── v1.0.0
Installed StructTypes ───────────────── v1.1.0
Installed PooledArrays ──────────────── v0.5.3
Installed SentinelArrays ────────────── v1.2.16
Installed QuadGK ────────────────────── v2.4.1
Installed JSON ──────────────────────── v0.21.1
Installed IteratorInterfaceExtensions ─ v1.0.0
Installed Lz4_jll ───────────────────── v1.9.2+2
Installed CanopyLayers ──────────────── v0.1.1
Installed DataStructures ────────────── v0.18.7
Installed Blosc_jll ─────────────────── v1.14.3+1
Installed XML2_jll ──────────────────── v2.9.10+2
Installed HDF5 ──────────────────────── v0.13.6
Installed CodecZlib ─────────────────── v0.7.0
Installed BenchmarkTools ────────────── v0.5.0
Installed Intervals ─────────────────── v1.4.2
Installed Polynomials ───────────────── v1.1.9
Installed UnPack ────────────────────── v1.0.2
Installed Libiconv_jll ──────────────── v1.16.0+6
Installed OrderedCollections ────────── v1.3.1
Installed MAT ───────────────────────── v0.8.1
Installed Zstd_jll ──────────────────── v1.4.5+1
Installed Photosynthesis ────────────── v0.1.1
Installed HDF5_jll ──────────────────── v1.10.5+6
Installed ConstrainedRootSolvers ────── v0.1.0
Installed ExprTools ─────────────────── v0.1.2
Installed TableTraits ───────────────── v1.0.0
Installed InvertedIndices ───────────── v1.0.0
Installed RecipesBase ───────────────── v1.1.0
Installed EzXML ─────────────────────── v1.1.0
Installed Reexport ──────────────────── v0.2.0
Installed DocStringExtensions ───────── v0.8.3
Installed Parameters ────────────────── v0.12.1
Installed Missings ──────────────────── v0.4.4
Installed OffsetArrays ──────────────── v1.3.0
Installed PlantHydraulics ───────────── v0.1.1
Installed TimeZones ─────────────────── v1.4.0
Installed CSV ───────────────────────── v0.7.7
Updating `~/.julia/environments/v1.6/Project.toml`
[2d76e174] + SoilPlantAirContinuum v0.1.1
Updating `~/.julia/environments/v1.6/Manifest.toml`
[6e4b80f9] + BenchmarkTools v0.5.0
[a74b3585] + Blosc v0.7.0
[0b7ba130] + Blosc_jll v1.14.3+1
[e1450e63] + BufferedStreams v1.0.0
[6eacf6c3] + CLIMAParameters v0.1.8
[336ed68f] + CSV v0.7.7
[677f5362] + CanopyLayers v0.1.1
[324d7699] + CategoricalArrays v0.8.3
[944b1d66] + CodecZlib v0.7.0
[34da2185] + Compat v3.18.0
[7e2492bd] + ConstrainedRootSolvers v0.1.0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.7
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[ffbed154] + DocStringExtensions v0.8.3
[e2ba6199] + ExprTools v0.1.2
[8f5d6c58] + EzXML v1.1.0
[f67ccb44] + HDF5 v0.13.6
[0234f1f7] + HDF5_jll v1.10.5+6
[d8418881] + Intervals v1.4.2
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[94ce4f54] + Libiconv_jll v1.16.0+6
[5ced341a] + Lz4_jll v1.9.2+2
[23992714] + MAT v0.8.1
[e1d29d7a] + Missings v0.4.4
[78c3b35d] + Mocking v0.7.1
[6fe1bfb0] + OffsetArrays v1.3.0
[bac558e1] + OrderedCollections v1.3.1
[d96e819e] + Parameters v0.12.1
[69de0a69] + Parsers v1.0.10
[537ec7c9] + Photosynthesis v0.1.1
[d6acb6ec] + PlantHydraulics v0.1.1
[f27b6e38] + Polynomials v1.1.9
[2dfb63ee] + PooledArrays v0.5.3
[1fd47b50] + QuadGK v2.4.1
[3cdcf5f2] + RecipesBase v1.1.0
[189a3867] + Reexport v0.2.0
[91c51154] + SentinelArrays v1.2.16
[2d76e174] + SoilPlantAirContinuum v0.1.1
[a2af1166] + SortingAlgorithms v0.3.1
[5fa394f2] + StomataModels v0.1.0
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[f269a46b] + TimeZones v1.4.0
[3bb67fe8] + TranscodingStreams v0.9.5
[3a884ed6] + UnPack v1.0.2
[20dd5ee6] + WaterPhysics v0.1.0
[02c8fc9c] + XML2_jll v2.9.10+2
[83775a58] + Zlib_jll v1.2.11+16
[3161d3a3] + Zstd_jll v1.4.5+1
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Building HDF5 ─────→ `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/0713cbabdf855852dfab3ce6447c87145f3d9ea8/build.log`
Building TimeZones → `~/.julia/scratchspaces/44cfe95a-1eb2-52ea-b672-e2afdf69b78f/2c48caca8f3912857973590a9757e1f86cbbff81/build.log`
Testing SoilPlantAirContinuum
Status `/tmp/jl_YJgF4X/Project.toml`
[6e4b80f9] BenchmarkTools v0.5.0
[6eacf6c3] CLIMAParameters v0.1.8
[336ed68f] CSV v0.7.7
[677f5362] CanopyLayers v0.1.1
[7e2492bd] ConstrainedRootSolvers v0.1.0
[a93c6f00] DataFrames v0.21.7
[ffbed154] DocStringExtensions v0.8.3
[d96e819e] Parameters v0.12.1
[537ec7c9] Photosynthesis v0.1.1
[d6acb6ec] PlantHydraulics v0.1.1
[2d76e174] SoilPlantAirContinuum v0.1.1
[5fa394f2] StomataModels v0.1.0
[20dd5ee6] WaterPhysics v0.1.0
[10745b16] Statistics
[8dfed614] Test
Status `/tmp/jl_YJgF4X/Manifest.toml`
[6e4b80f9] BenchmarkTools v0.5.0
[a74b3585] Blosc v0.7.0
[0b7ba130] Blosc_jll v1.14.3+1
[e1450e63] BufferedStreams v1.0.0
[6eacf6c3] CLIMAParameters v0.1.8
[336ed68f] CSV v0.7.7
[677f5362] CanopyLayers v0.1.1
[324d7699] CategoricalArrays v0.8.3
[944b1d66] CodecZlib v0.7.0
[34da2185] Compat v3.18.0
[7e2492bd] ConstrainedRootSolvers v0.1.0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.7
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[ffbed154] DocStringExtensions v0.8.3
[e2ba6199] ExprTools v0.1.2
[8f5d6c58] EzXML v1.1.0
[f67ccb44] HDF5 v0.13.6
[0234f1f7] HDF5_jll v1.10.5+6
[d8418881] Intervals v1.4.2
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[94ce4f54] Libiconv_jll v1.16.0+6
[5ced341a] Lz4_jll v1.9.2+2
[23992714] MAT v0.8.1
[e1d29d7a] Missings v0.4.4
[78c3b35d] Mocking v0.7.1
[6fe1bfb0] OffsetArrays v1.3.0
[bac558e1] OrderedCollections v1.3.1
[d96e819e] Parameters v0.12.1
[69de0a69] Parsers v1.0.10
[537ec7c9] Photosynthesis v0.1.1
[d6acb6ec] PlantHydraulics v0.1.1
[f27b6e38] Polynomials v1.1.9
[2dfb63ee] PooledArrays v0.5.3
[1fd47b50] QuadGK v2.4.1
[3cdcf5f2] RecipesBase v1.1.0
[189a3867] Reexport v0.2.0
[91c51154] SentinelArrays v1.2.16
[2d76e174] SoilPlantAirContinuum v0.1.1
[a2af1166] SortingAlgorithms v0.3.1
[5fa394f2] StomataModels v0.1.0
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[f269a46b] TimeZones v1.4.0
[3bb67fe8] TranscodingStreams v0.9.5
[3a884ed6] UnPack v1.0.2
[20dd5ee6] WaterPhysics v0.1.0
[02c8fc9c] XML2_jll v2.9.10+2
[83775a58] Zlib_jll v1.2.11+16
[3161d3a3] Zstd_jll v1.4.5+1
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
Testing the FT and NaN of the structs...
Test Summary: | Pass Total
FT and NaN --- Types | 1066 1066
Testing the big_leaf_partition!...
Test Summary: | Pass Total
SoilPlantAirContinuum --- big_leaf_partition! | 942 942
Testing the gain_risk_map Function...
Test Summary: | Pass Total
SoilPlantAirContinuum --- gain_risk_map | 15360 15360
Testing the leaf_gas_exchange_nonopt! Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- leaf_gas_exchange_nonopt! | 1884 1884
Testing the leaf_gas_exchange! Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- leaf_gas_exchange! | 1884 1884
Testing the leaf_temperature* Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- leaf_temperature* | 12 12
Testing the optimize_flows! Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- optimize_flows! | 942 942
Testing the atmosheric* Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- atmosheric* | 12 12
Testing the zenith_angle Functions...
Test Summary: | Pass Total
SoilPlantAirContinuum --- zenith_angle | 12 12
Testing the annual_profit Functions...
SoilPlantAirContinuum --- annual_profit: Error During Test at /home/pkgeval/.julia/packages/SoilPlantAirContinuum/QhC3P/test/runtests.jl:306
Got exception outside of a @test
MethodError: no method matching typesubtract(::Type{Union{}}, ::Type{Int64})
Closest candidates are:
typesubtract(::Any, ::Any, !Matched::Int64) at compiler/typeutils.jl:66
Stacktrace:
[1] ts(T::Type, S::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:214
[2] nonstandardtype(T::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:217
[3] (::CSV.var"#17#23")(T::Type)
@ CSV ./none:0
[4] iterate(::Base.Iterators.Filter{CSV.var"#17#23", Vector{Type}})
@ Base.Iterators ./iterators.jl:451
[5] iterate
@ ./generator.jl:44 [inlined]
[6] Header
@ ~/.julia/packages/CSV/MKemC/src/header.jl:232 [inlined]
[7] CSV.File(source::String; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Nothing, footerskip::Int64, transpose::Bool, comment::Nothing, use_mmap::Nothing, ignoreemptylines::Bool, select::Nothing, drop::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, categorical::Nothing, pool::Float64, lazystrings::Bool, strict::Bool, silencewarnings::Bool, debug::Bool, parsingdebug::Bool, kw::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ CSV ~/.julia/packages/CSV/MKemC/src/file.jl:216
[8] CSV.File(source::String)
@ CSV ~/.julia/packages/CSV/MKemC/src/file.jl:216
[9] top-level scope
@ ~/.julia/packages/SoilPlantAirContinuum/QhC3P/test/runtests.jl:307
[10] top-level scope
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Test/src/Test.jl:1144
[11] top-level scope
@ ~/.julia/packages/SoilPlantAirContinuum/QhC3P/test/runtests.jl:307
[12] include(fname::String)
@ Base.MainInclude ./client.jl:444
[13] top-level scope
@ none:6
[14] eval(m::Module, e::Any)
@ Core ./boot.jl:360
[15] exec_options(opts::Base.JLOptions)
@ Base ./client.jl:261
[16] _start()
@ Base ./client.jl:485
Test Summary: | Error Total
SoilPlantAirContinuum --- annual_profit | 1 1
ERROR: LoadError: Some tests did not pass: 0 passed, 0 failed, 1 errored, 0 broken.
in expression starting at /home/pkgeval/.julia/packages/SoilPlantAirContinuum/QhC3P/test/runtests.jl:306
ERROR: Package SoilPlantAirContinuum errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19