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1.6.0-DEV-7d3dac44dc.log
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Julia Version 1.6.0-DEV.1148
Commit 7d3dac44dc (2020-10-06 21:26 UTC)
Platform Info:
OS: Linux (x86_64-pc-linux-gnu)
CPU: AMD EPYC 7502 32-Core Processor
WORD_SIZE: 64
LIBM: libopenlibm
LLVM: libLLVM-10.0.1 (ORCJIT, znver2)
Environment:
JULIA_DEPOT_PATH = ::/usr/local/share/julia
JULIA_NUM_THREADS = 2
Resolving package versions...
Installed LifeTable ──────────────────── v0.2.3
Installed PDMats ─────────────────────── v0.10.1
Installed OpenSpecFun_jll ────────────── v0.5.3+3
Installed CommonSubexpressions ───────── v0.3.0
Installed DataAPI ────────────────────── v1.3.0
Installed ArrayInterface ─────────────── v2.13.3
Installed CategoricalArrays ──────────── v0.8.3
Installed DataFrames ─────────────────── v0.21.7
Installed Rmath ──────────────────────── v0.6.1
Installed SortingAlgorithms ──────────── v0.3.1
Installed ShiftedArrays ──────────────── v1.0.0
Installed DiffResults ────────────────── v1.0.2
Installed Tables ─────────────────────── v1.1.0
Installed DiffRules ──────────────────── v1.0.1
Installed Compat ─────────────────────── v3.18.0
Installed DataValueInterfaces ────────── v1.0.0
Installed Parsers ────────────────────── v1.0.10
Installed JSON ───────────────────────── v0.21.1
Installed StructTypes ────────────────── v1.1.0
Installed MacroTools ─────────────────── v0.5.5
Installed NaNMath ────────────────────── v0.3.4
Installed SpecialFunctions ───────────── v0.10.3
Installed FillArrays ─────────────────── v0.9.6
Installed CompilerSupportLibraries_jll ─ v0.3.3+0
Installed NLSolversBase ──────────────── v7.7.1
Installed LsqFit ─────────────────────── v0.11.0
Installed StatsBase ──────────────────── v0.33.1
Installed SentinelArrays ─────────────── v1.2.16
Installed PooledArrays ───────────────── v0.5.3
Installed QuadGK ─────────────────────── v2.4.1
Installed IteratorInterfaceExtensions ── v1.0.0
Installed StatsModels ────────────────── v0.6.15
Installed StaticArrays ───────────────── v0.12.4
Installed Requires ───────────────────── v1.1.0
Installed GLM ────────────────────────── v1.3.10
Installed DataStructures ─────────────── v0.18.7
Installed ForwardDiff ────────────────── v0.10.12
Installed InvertedIndices ────────────── v1.0.0
Installed OptimBase ──────────────────── v2.0.1
Installed TableTraits ────────────────── v1.0.0
Installed OrderedCollections ─────────── v1.3.1
Installed Distributions ──────────────── v0.23.12
Installed Rmath_jll ──────────────────── v0.2.2+1
Installed Reexport ───────────────────── v0.2.0
Installed Missings ───────────────────── v0.4.4
Installed FiniteDiff ─────────────────── v2.7.0
Installed StatsFuns ──────────────────── v0.9.5
Installed CSV ────────────────────────── v0.7.7
Updating `~/.julia/environments/v1.6/Project.toml`
[4210c81c] + LifeTable v0.2.3
Updating `~/.julia/environments/v1.6/Manifest.toml`
[4fba245c] + ArrayInterface v2.13.3
[336ed68f] + CSV v0.7.7
[324d7699] + CategoricalArrays v0.8.3
[bbf7d656] + CommonSubexpressions v0.3.0
[34da2185] + Compat v3.18.0
[e66e0078] + CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] + DataAPI v1.3.0
[a93c6f00] + DataFrames v0.21.7
[864edb3b] + DataStructures v0.18.7
[e2d170a0] + DataValueInterfaces v1.0.0
[163ba53b] + DiffResults v1.0.2
[b552c78f] + DiffRules v1.0.1
[31c24e10] + Distributions v0.23.12
[1a297f60] + FillArrays v0.9.6
[6a86dc24] + FiniteDiff v2.7.0
[f6369f11] + ForwardDiff v0.10.12
[38e38edf] + GLM v1.3.10
[41ab1584] + InvertedIndices v1.0.0
[82899510] + IteratorInterfaceExtensions v1.0.0
[682c06a0] + JSON v0.21.1
[4210c81c] + LifeTable v0.2.3
[2fda8390] + LsqFit v0.11.0
[1914dd2f] + MacroTools v0.5.5
[e1d29d7a] + Missings v0.4.4
[d41bc354] + NLSolversBase v7.7.1
[77ba4419] + NaNMath v0.3.4
[efe28fd5] + OpenSpecFun_jll v0.5.3+3
[87e2bd06] + OptimBase v2.0.1
[bac558e1] + OrderedCollections v1.3.1
[90014a1f] + PDMats v0.10.1
[69de0a69] + Parsers v1.0.10
[2dfb63ee] + PooledArrays v0.5.3
[1fd47b50] + QuadGK v2.4.1
[189a3867] + Reexport v0.2.0
[ae029012] + Requires v1.1.0
[79098fc4] + Rmath v0.6.1
[f50d1b31] + Rmath_jll v0.2.2+1
[91c51154] + SentinelArrays v1.2.16
[1277b4bf] + ShiftedArrays v1.0.0
[a2af1166] + SortingAlgorithms v0.3.1
[276daf66] + SpecialFunctions v0.10.3
[90137ffa] + StaticArrays v0.12.4
[2913bbd2] + StatsBase v0.33.1
[4c63d2b9] + StatsFuns v0.9.5
[3eaba693] + StatsModels v0.6.15
[856f2bd8] + StructTypes v1.1.0
[3783bdb8] + TableTraits v1.0.0
[bd369af6] + Tables v1.1.0
[56f22d72] + Artifacts
[2a0f44e3] + Base64
[ade2ca70] + Dates
[8bb1440f] + DelimitedFiles
[8ba89e20] + Distributed
[9fa8497b] + Future
[b77e0a4c] + InteractiveUtils
[76f85450] + LibGit2
[8f399da3] + Libdl
[37e2e46d] + LinearAlgebra
[56ddb016] + Logging
[d6f4376e] + Markdown
[a63ad114] + Mmap
[44cfe95a] + Pkg
[de0858da] + Printf
[3fa0cd96] + REPL
[9a3f8284] + Random
[ea8e919c] + SHA
[9e88b42a] + Serialization
[1a1011a3] + SharedArrays
[6462fe0b] + Sockets
[2f01184e] + SparseArrays
[10745b16] + Statistics
[4607b0f0] + SuiteSparse
[fa267f1f] + TOML
[8dfed614] + Test
[cf7118a7] + UUIDs
[4ec0a83e] + Unicode
Testing LifeTable
Status `/tmp/jl_iZ3M40/Project.toml`
[336ed68f] CSV v0.7.7
[a93c6f00] DataFrames v0.21.7
[38e38edf] GLM v1.3.10
[4210c81c] LifeTable v0.2.3
[2fda8390] LsqFit v0.11.0
[8dfed614] Test
Status `/tmp/jl_iZ3M40/Manifest.toml`
[4fba245c] ArrayInterface v2.13.3
[336ed68f] CSV v0.7.7
[324d7699] CategoricalArrays v0.8.3
[bbf7d656] CommonSubexpressions v0.3.0
[34da2185] Compat v3.18.0
[e66e0078] CompilerSupportLibraries_jll v0.3.3+0
[9a962f9c] DataAPI v1.3.0
[a93c6f00] DataFrames v0.21.7
[864edb3b] DataStructures v0.18.7
[e2d170a0] DataValueInterfaces v1.0.0
[163ba53b] DiffResults v1.0.2
[b552c78f] DiffRules v1.0.1
[31c24e10] Distributions v0.23.12
[1a297f60] FillArrays v0.9.6
[6a86dc24] FiniteDiff v2.7.0
[f6369f11] ForwardDiff v0.10.12
[38e38edf] GLM v1.3.10
[41ab1584] InvertedIndices v1.0.0
[82899510] IteratorInterfaceExtensions v1.0.0
[682c06a0] JSON v0.21.1
[4210c81c] LifeTable v0.2.3
[2fda8390] LsqFit v0.11.0
[1914dd2f] MacroTools v0.5.5
[e1d29d7a] Missings v0.4.4
[d41bc354] NLSolversBase v7.7.1
[77ba4419] NaNMath v0.3.4
[efe28fd5] OpenSpecFun_jll v0.5.3+3
[87e2bd06] OptimBase v2.0.1
[bac558e1] OrderedCollections v1.3.1
[90014a1f] PDMats v0.10.1
[69de0a69] Parsers v1.0.10
[2dfb63ee] PooledArrays v0.5.3
[1fd47b50] QuadGK v2.4.1
[189a3867] Reexport v0.2.0
[ae029012] Requires v1.1.0
[79098fc4] Rmath v0.6.1
[f50d1b31] Rmath_jll v0.2.2+1
[91c51154] SentinelArrays v1.2.16
[1277b4bf] ShiftedArrays v1.0.0
[a2af1166] SortingAlgorithms v0.3.1
[276daf66] SpecialFunctions v0.10.3
[90137ffa] StaticArrays v0.12.4
[2913bbd2] StatsBase v0.33.1
[4c63d2b9] StatsFuns v0.9.5
[3eaba693] StatsModels v0.6.15
[856f2bd8] StructTypes v1.1.0
[3783bdb8] TableTraits v1.0.0
[bd369af6] Tables v1.1.0
[56f22d72] Artifacts
[2a0f44e3] Base64
[ade2ca70] Dates
[8bb1440f] DelimitedFiles
[8ba89e20] Distributed
[9fa8497b] Future
[b77e0a4c] InteractiveUtils
[76f85450] LibGit2
[8f399da3] Libdl
[37e2e46d] LinearAlgebra
[56ddb016] Logging
[d6f4376e] Markdown
[a63ad114] Mmap
[44cfe95a] Pkg
[de0858da] Printf
[3fa0cd96] REPL
[9a3f8284] Random
[ea8e919c] SHA
[9e88b42a] Serialization
[1a1011a3] SharedArrays
[6462fe0b] Sockets
[2f01184e] SparseArrays
[10745b16] Statistics
[4607b0f0] SuiteSparse
[fa267f1f] TOML
[8dfed614] Test
[cf7118a7] UUIDs
[4ec0a83e] Unicode
Testing Running tests...
┌ Warning: `CSV.read(input; kw...)` is deprecated in favor of `using DataFrames; CSV.read(input, DataFrame; kw...)
│ caller = read(source::String) at CSV.jl:40
└ @ CSV ~/.julia/packages/CSV/MKemC/src/CSV.jl:40
ERROR: LoadError: MethodError: no method matching typesubtract(::Type{Union{}}, ::Type{Int64})
Closest candidates are:
typesubtract(::Any, ::Any, !Matched::Int64) at compiler/typeutils.jl:66
Stacktrace:
[1] ts(T::Type, S::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:214
[2] nonstandardtype(T::Type)
@ CSV ~/.julia/packages/CSV/MKemC/src/utils.jl:217
[3] (::CSV.var"#17#23")(T::Type)
@ CSV ./none:0
[4] iterate(::Base.Iterators.Filter{CSV.var"#17#23", Vector{Type}})
@ Base.Iterators ./iterators.jl:451
[5] iterate
@ ./generator.jl:44 [inlined]
[6] Header
@ ~/.julia/packages/CSV/MKemC/src/header.jl:232 [inlined]
[7] CSV.File(source::String; header::Int64, normalizenames::Bool, datarow::Int64, skipto::Nothing, footerskip::Int64, transpose::Bool, comment::Nothing, use_mmap::Nothing, ignoreemptylines::Bool, select::Nothing, drop::Nothing, missingstrings::Vector{String}, missingstring::String, delim::Nothing, ignorerepeated::Bool, quotechar::Char, openquotechar::Nothing, closequotechar::Nothing, escapechar::Char, dateformat::Nothing, dateformats::Nothing, decimal::UInt8, truestrings::Vector{String}, falsestrings::Vector{String}, type::Nothing, types::Nothing, typemap::Dict{Type, Type}, categorical::Nothing, pool::Float64, lazystrings::Bool, strict::Bool, silencewarnings::Bool, debug::Bool, parsingdebug::Bool, kw::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{, Tuple{}}})
@ CSV ~/.julia/packages/CSV/MKemC/src/file.jl:216
[8] CSV.File(source::String)
@ CSV ~/.julia/packages/CSV/MKemC/src/file.jl:216
[9] read(source::String, sink::Nothing; copycols::Bool, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{, Tuple{}}})
@ CSV ~/.julia/packages/CSV/MKemC/src/CSV.jl:44
[10] read
@ ~/.julia/packages/CSV/MKemC/src/CSV.jl:40 [inlined]
[11] top-level scope
@ ~/.julia/packages/LifeTable/MDhwI/test/runtests.jl:8
[12] include(fname::String)
@ Base.MainInclude ./client.jl:444
[13] top-level scope
@ none:6
in expression starting at /home/pkgeval/.julia/packages/LifeTable/MDhwI/test/runtests.jl:8
ERROR: Package LifeTable errored during testing
Stacktrace:
[1] pkgerror(msg::String)
@ Pkg.Types /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Types.jl:52
[2] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, julia_args::Cmd, test_args::Cmd, test_fn::Nothing)
@ Pkg.Operations /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/Operations.jl:1609
[3] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec}; coverage::Bool, test_fn::Nothing, julia_args::Cmd, test_args::Cmd, kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:331
[4] test(ctx::Pkg.Types.Context, pkgs::Vector{Pkg.Types.PackageSpec})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:318
[5] #test#62
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[6] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:68 [inlined]
[7] #test#61
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[8] test
@ /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:66 [inlined]
[9] test(pkg::String; kwargs::Base.Iterators.Pairs{Union{}, Union{}, Tuple{}, NamedTuple{(), Tuple{}}})
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[10] test(pkg::String)
@ Pkg.API /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.6/Pkg/src/API.jl:65
[11] top-level scope
@ none:19