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Commits on Jun 19, 2018

• Remove all occurrences of VariantInfo.field_count (googlegenomics#278)

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  samanvp

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Commits on Jun 15, 2018

• Update zone/region doc. (googlegenomics#276)

  arostamianfar

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Commits on Jun 14, 2018

• Add integration tests for update_schema_on_append googlegenomics#83 (googlegenomics#266)

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  allieychen

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Commits on Jun 13, 2018

• update the job name to be unique googlegenomics#271 (googlegenomics#273)

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  allieychen

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Commits on Jun 12, 2018

• change to directrunner googlegenomics#255 (googlegenomics#270)

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  allieychen

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Commits on Jun 11, 2018

• Update default vep_cache in variant_annotation.md. (googlegenomics#269)

  bashir2

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• Set version to 0.4.0. (googlegenomics#268)

  arostamianfar

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• update the doc (googlegenomics#267)

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  allieychen

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Commits on Jun 8, 2018

• Minor note about mismatches being dropped. (googlegenomics#264)

  bashir2

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• Add documentation for partitioning (googlegenomics#263)

  samanvp

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• Updates annotation doc with default values and troubleshooting. (googlegenomics#262)

  bashir2

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• Default values for VEP image and cache. (googlegenomics#261)

  bashir2

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• Update the schema googlegenomics#83 (googlegenomics#260)

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  allieychen

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Commits on Jun 7, 2018

• Update integration tests to run in parallel (googlegenomics#259)

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  allieychen

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• Add more tests for preprocessor googlegenomics#206 (googlegenomics#256)

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  allieychen

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Commits on Jun 1, 2018

• Add integration tests for partitioning (googlegenomics#251)

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  samanvp

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• Add time stamp (googlegenomics#254)

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  allieychen

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Commits on May 31, 2018

• Switch integration tests to use us-east as it has max 25 IPs. (googlegenomics#253)

  arostamianfar

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• Partitioning Part 2 (input config file) (googlegenomics#246)

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  samanvp

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• Integration tests fail (googlegenomics#244)

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  allieychen

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Commits on May 29, 2018

• remove (googlegenomics#243)

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  allieychen

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• Add preprocessor integration tests googlegenomics#206 (googlegenomics#237)

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  allieychen

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Commits on May 28, 2018

• Add types (issue 189) (googlegenomics#241)

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  allieychen

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Commits on May 24, 2018

• Add join query to annotation doc. (googlegenomics#240)

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  arostamianfar

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Commits on May 22, 2018

• Add type annotation for beam.io googlegenomics#189 (googlegenomics#238)

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  allieychen

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Commits on May 9, 2018

• Set version to 0.3.0. (googlegenomics#235)

  arostamianfar

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• Integration tests for running VEP and fixing another annotation alt matching edge case. (googlegenomics#234)

  bashir2

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• Add back the refactor (googlegenomics#233)

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  allieychen

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Commits on May 8, 2018

• Add malformed records to the report (googlegenomics#225)

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  allieychen

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• Making num of output shards an input flag (googlegenomics#232)

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Commits on May 4, 2018

• Minor tweaks to the annotation doc. (googlegenomics#228)

  bashir2

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• Update the docker and the doc (googlegenomics#227)

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  allieychen

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Commits on May 3, 2018

• Another hack to avoid BigQuery write failure (googlegenomics#226)

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  samanvp

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Commits on May 2, 2018

• First version of the annotation document.

  bashir2

  authored
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• Format the report googlegenomics#178 (googlegenomics#214)

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  allieychen

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