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R_by-halpo.xml
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R_by-halpo.xml
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<NotepadPlus>
<UserLang name="R" ext="R"> <!--Added as part of NppToR-->
<Settings>
<Global caseIgnored="no"/>
<TreatAsSymbol comment="no" commentLine="yes"/>
<Prefix words1="yes" words2="no" words3="no" words4="no"/>
</Settings>
<KeywordLists>
<Keywords name="Delimiters">'"0'"0</Keywords>
<Keywords name="Folder+">{</Keywords>
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<Keywords name="Operators">- ! $ % & ( ) * , / : ; ? @ [ \ ] ^ | ~ + < = ></Keywords>
<Keywords name="Comment">1 2 0#</Keywords>
<Keywords name="Words1">as. format. is. print. plot. predict. summary. Summary. sys. Sys. grid.</Keywords>
<Keywords name="Words2">C c if else for while repeat break next in TRUE FALSE NULL Inf NaN NA NA_integer_ NA_real_ NA_complex_ NA_character_ ... ..1 ..2</Keywords>
<Keywords name="Words3">T F abbreviate abline abs acos acosh add.scope add1 addTaskCallback aggregate AIC AIC.logLik alias alist all all.equal all.equal.POSIXct all.names all.vars anova anova.glm anova.glmlist anova.lm anova.lmlist anova.mlm anovalist.lm anscombe any aov aperm append apply approx approxfun apropos Arg args Arithmetic array arrows asin asinh assign assocplot atan atan2 atanh attach attenu attitude attr attr.all.equal attributes autoload autoloader ave axis axis.POSIXct backsolve barplot basename BATCH Bessel bessel besselI besselJ besselK besselY Beta beta Binomial binomial bitmap bmp body box boxplot boxplot.formula boxplot.stats bringToTop browser bug.report build builtins bw.bcv bw.nrd bw.nrd0 bw.SJ bw.ucv bxp by bzfile c.POSIXct c.POSIXlt call capabilities cars case.names casefold cat Cauchy cbind cbind.ts ceiling char.expand character charmatch chartr check check.options chickwts Chisquare chol chol2inv choose chull class close close.screen close.socket closeAllConnections cm cm.colors co.intervals co2 codes coef coefficients coefficients.glm coefficients.lm col col2rgb colMeans colnames colors colours colSums commandArgs comment compareVersion Comparison complete.cases complex conflicts Conj connection connections contour contr.helmert contr.poly contr.sum contr.treatment contrasts contrib.url contributors Control convolve cooks.distance coplot copyright copyrights cor cos cosh count.fields cov cov.wt covratio CRAN.packages crossprod cummax cummin cumprod cumsum curve cut cut.POSIXt cycle D data data.class data.entry data.frame data.matrix dataentry date DateTimeClasses dbeta dbinom dcauchy dchisq de debug debugger delay delete.response deltat demo density deparse Deprecated deriv deriv3 det detach determinant dev.control dev.copy dev.copy2eps dev.cur dev.interactive dev.list dev.next dev.off dev.prev dev.print dev.set dev2bitmap deviance device Devices dexp df df.residual dfbetas dffits dgamma dgeom dget dhyper diag diff diff.ts difftime digamma dim dimnames dir dir.create dirname discoveries DLL.version dlnorm dlogis dnbinom dnorm do.call dotchart double download.file download.packages dpois dput drop drop.scope drop.terms drop1 dsignrank dt dummy.coef dump dump.frames dunif duplicated dweibull dwilcox dyn.load dyn.unload edit edit.data.frame edit.default edit.matrix eff.aovlist effects eigen emacs end environment erase.screen esoph euro eurodist eval evalq example exists exp expand.grid expand.model.frame expm1 Exponential expression Extract extractAIC factor factor.scope faithful family family.glm family.lm FDist fft fifo file file.access file.append file.choose file.copy file.create file.exists file.info file.path file.remove file.rename file.show files filled.contour find findInterval fitted fitted.values.glm fitted.values.lm fivenum fix floor flush.console Foreign Formaldehyde formals format formatC formatDL formula formula.lm formula.terms forwardsolve fourfoldplot frame freeny frequency ftable ftable.formula function Gamma gamma gammaCody GammaDist gaussian gc gc.time gcinfo gctorture Geometric get getAllConnections getCConverterDescriptions getCConverterStatus getConnection geterrmessage getNativeSymbolInfo getNumCConverters getOption getTaskCallbackNames getwd gl glm glm.control glm.fit globalenv graphics.off gray grep grey grid gsub gzfile HairEyeColor hasTsp hat heat.colors help help.search help.start Hershey hist hist.POSIXt history hsv Hypergeometric I identical identify ifelse Im image index.search infert influence.measures inherits InsectSprays INSTALL install.packages installed.packages integer integrate interaction interaction.plot interactive intersect inverse.gaussian inverse.rle invisible IQR isIncomplete islands ISOdate ISOdatetime ISOLatin1 isOpen isSeekable Japanese jitter jpeg julian kappa kronecker La.eigen La.svd labels lapply layout lbeta lchoose lcm legend length LETTERS letters levels lgamma library library.dynam licence license LifeCycleSavings limitedLabels lines lines.formula lines.histogram lines.ts link.html.help list list.files lm lm.fit lm.influence lm.wfit load loadhistory local localeconv locales locator log log10 log1p log2 logb Logic logical Logistic logLik logLik.glm logLik.lm loglin Lognormal longley lower.tri lowess ls ls.diag ls.print ls.str lsf.str lsfit Machine machine MacRoman mad mahalanobis make.link make.names make.packages.html make.search.html make.socket makepredictcall makepredictcall.poly manova margin.table mat.or.vec match match.arg match.call match.fun Math Math.POSIXlt Math.POSIXt matlines matmult matplot matpoints matrix max max.col mean mean.POSIXct mean.POSIXlt median mem.limits Memory memory.limit memory.profile memory.size menu merge Methods methods min missing Mod mode model.extract model.frame model.matrix model.matrix.glm.null model.matrix.lm model.offset model.response model.tables model.weights month.abb month.name months morley mosaicplot mtcars mtext mvfft n2mfrow na.action na.exclude na.fail na.omit na.omit.ts na.pass name names napredict naprint naresid nargs native.enc nchar nclass.FD nclass.scott nclass.Sturges NCOL ncol NegBinomial new.env newestVersion NextMethod nextn nhtemp nlevels nlm noquote Normal NotYetImplemented NotYetUsed NROW nrow numeric object.size objects offset old-piechart old.packages on.exit open Ops Ops.POSIXct Ops.POSIXlt Ops.POSIXt Ops.ts optim optimise optimize options OrchardSprays order ordered outer p.adjust package.contents package.dependencies package.description package.skeleton packageStatus page pairlist pairs pairs.formula palette panel.smooth par Paren parent.env parent.frame parse paste path.expand pbeta pbinom pbirthday pcauchy pchisq pdf pentagamma persp pexp pf pgamma pgeom phones phyper pi pico pictex pie piechart pipe PlantGrowth Platform plnorm plogis plot plotmath pmatch pmax pmin pnbinom png pnorm points points.formula Poisson poisson poly polygon polym polyroot pos.to.env POSIXct POSIXlt postscript power ppoints ppois precip predict preplot presidents pressure pretty prettyNum print prmatrix proc.time prod profile proj prompt prop.table ps.options psignrank pt ptukey punif pushBack pushBackLength pweibull pwilcox q qbeta qbinom qbirthday qcauchy qchisq qexp qf qgamma qgeom qhyper qlnorm qlogis qnbinom qnorm qpois qqline qqnorm qqplot qr qr.Q qr.qty qr.qy qr.R qr.resid qr.solve qr.X qsignrank qt qtukey quakes quantile quarters quasi quasibinomial quasipoisson quit qunif quote qweibull qwilcox R.home R.Version R.version rainbow Random.user randu range rank rbeta rbind rbinom rcauchy rchisq Rconsole Rd2dvi Rd2txt Rdconv Rdevga Rdindex Re read.00Index read.csv read.csv2 read.dcf read.delim read.delim2 read.ftable read.fwf read.socket read.table readBin readChar readline readLines real Recall recordPlot recover rect reformulate reg.finalizer regexpr relevel REMOVE remove remove.packages removeCConverter removeTaskCallback Renviron.site rep replace replayPlot replicate require reshape resid residuals residuals.glm residuals.lm restart return rev rexp rf rgamma rgb rgeom rhyper rivers rle rlnorm rlogis rm rnbinom RNG RNGkind rnorm round round.difftime round.POSIXt row row.names rowMeans rownames rowsum rowSums rpois Rprof Rprofile rsignrank rstandard rstudent rt rug runif rweibull rwilcox R_LIBS SafePrediction sample sapply save savehistory savePlot scale scan screen sd Sd2Rd se.contrast search searchpaths seek segments select.list seq seq.POSIXt sequence set.seed setCConverterStatus setdiff setequal setwd shell shell.exec SHLIB showConnections sign signif SignRank sin single sinh sink sleep socketConnection solve sort sort.list source Special spline splinefun split split.screen sprintf sqrt stack stack.loss stack.x stackloss stars start Startup stat.anova state stderr stdin stdout stem step stop stopifnot storage.mode str str.logLik str.POSIXt strftime strheight stripchart strptime strsplit structure strwidth strwrap sub Subscript subset substitute substr substring sum Summary summary sunflowerplot sunspots svd sweep swiss switch symbol.C symbol.For symbols symnum Syntax system system.file system.time t table tabulate tan tanh tapply taskCallbackManager TDist tempfile termplot terms terms.formula terms.object terms.terms terrain.colors tetragamma text textConnection time Titanic title tolower ToothGrowth topo.colors toString toupper trace traceback transform trees Trig trigamma trunc trunc.POSIXt truncate try ts tsp Tukey TukeyHSD type.convert typeof UCBAdmissions unclass undebug Uniform union unique uniroot unix unix.time unlink unlist unname unsplit unstack untrace unz update update.formula update.packages update.packageStatus upgrade upper.tri url url.show UseMethod var variable.names vector version vi volcano warning warnings weekdays Weibull weighted.mean weighted.residuals weights weights.glm weights.lm which which.max which.min Wilcoxon win.graph win.metafile win.print win.version WinAnsi winDialog winDialogString window windows winMenuAdd winMenuAddItem winMenuDel winMenuDelItem with women write write.dcf write.ftable write.socket write.table writeBin writeChar writeLines X11 x11 xedit xemacs xfig xinch xor xpdrows.data.frame xtabs xy.coords xyinch xyz.coords yinch zapsmall zip.file.extract zip.unpack tcrossprod</Keywords>
<Keywords name="Words4">abc.ci acme aids aircondit aircondit7 amis aml arima.sim basic.ci bca.ci beaver bigcity birthwt boot boot.array boot.ci boot.object boot.return bootci.object brambles breslow calcium cane capability cats catsM cav cd4 cd4.nested cement cens.return censboot channing city claridge cloth co.transfer coal const control corr cum3 cv.glm darwin dogs downs.bc ducks EEF.profile EL.profile empinf envelope exp.tilt fir freq.array frets glm.diag glm.diag.plots grav gravity hirose iden Imp.Estimates imp.moments imp.prob imp.quantile imp.reg imp.weights inv.logit islay jack.after.boot k3.linear leuk linear.approx lines.saddle.distn logit lynx mammals manaus mcycle melanoma motor neuro nitrofen nodal norm.ci normalize nuclear paulsen perc.ci poisons polar remission rock saddle saddle.distn saddle.distn.object salinity simplex simplex.object smooth.f stud.ci sunspot survival tau tilt.boot ts.return tsboot tuna urine var.linear wool zero batchSOM condense knn knn.cv knn1 lvq1 lvq2 lvq3 lvqinit lvqtest multiedit olvq1 reduce.nn SOM somgrid agnes agnes.object agriculture animals clara clara.object clusplot clusplot.default clusplot.partition daisy diana diana.object dissimilarity.object ellipsoidhull ellipsoidPoints fanny fanny.object flower lower.to.upper.tri.inds mona mona.object pam pam.object partition.object pltree pltree.twins pluton ruspini sizeDiss twins.object upper.to.lower.tri.inds volume votes.repub xclara ansari.test bartlett.test binom.test chisq.test cor.test fisher.test fligner.test friedman.test kruskal.test ks.test mantelhaen.test mcnemar.test mood.test oneway.test pairwise.prop.test pairwise.t.test pairwise.table pairwise.wilcox.test power.prop.test power.t.test prop.test prop.trend.test quade.test shapiro.test t.test var.test wilcox.test coef.tukeyline fitted.tukeyline line medpolish residuals.tukeyline smooth data.restore lookup.xport read.dta read.epiinfo read.mtp read.S read.spss read.ssd read.xport SModeNames write.dta absolute absolute.size absolute.units clear.display.list clearpage col.spec common.draw.axis convert.gpar convertNative copy current.viewport dataViewport draw.all draw.details draw.details.line.to draw.details.lines draw.details.move.to draw.details.points draw.details.polygon draw.details.rect draw.details.segments draw.details.text draw.details.viewport draw.details.xaxis draw.details.yaxis draw.frame.child editDetails get.gpar get.value gpar Grid height height.details height.details.default height.details.frame height.details.rect height.details.text height.details.viewport height.frame height.lines height.post height.post.details.default height.pre height.pre.details.default height.text inc.display.list justifyX justifyY layout.heights layout.ncol layout.nrow layout.respect layout.torture layout.widths make.xaxis.labels make.xaxis.major make.xaxis.ticks make.yaxis.labels make.yaxis.major make.yaxis.ticks mod.dims new.col new.row num.col.specs num.row.specs Ops.unit origin.bottom origin.left origin.right origin.top plotViewport pop.saved.gpars pop.saved.Rpars pop.viewport pop.vp push.saved.gpars push.saved.Rpars push.viewport push.vp record recycle.data row.spec saved.pars set.gpar set.value.grob set.viewport stack.viewports swap.origin.horizontal swap.origin.vertical unit unit.arithmetic unit.c unit.length unit.list unit.list.from.list unit.list.length unit.list.rep unit.pmax unit.pmin unit.rep unset.gpar unstack.viewports updateCol updateRow valid.data valid.just valid.layout valid.origin valid.pch valid.unit valid.units valid.viewport validGP viewport viewport.layout width width.details width.details.default width.details.frame width.details.rect width.details.text width.details.viewport width.frame width.lines width.post width.post.details.default width.pre width.pre.details.default width.text bkde bkde2D bkfe dpih dpik dpill geyser locpoly banking barchart barley bwplot canonical.theme cloud col.whitebg contourplot densityplot dotplot draw.colorkey draw.key environmental equal.count ethanol histogram larrows Lattice lattice.theme latticeParseFormula levelplot llines lplot.xy lpoints lsegments lset ltext melanoma oneway panel.abline panel.barchart panel.bwplot panel.cloud panel.densityplot panel.dotplot panel.fill panel.grid panel.histogram panel.levelplot panel.linejoin panel.lmline panel.loess panel.mathdensity panel.pairs panel.parallel panel.qq panel.qqmath panel.qqmathline panel.splom panel.stripplot panel.superpose panel.tmd panel.wireframe panel.xyplot parallel prepanel.lmline prepanel.loess prepanel.qqmathline qq qqmath rfs shingle show.settings singer splom strip.default stripplot sunspot tmd trellis.device trellis.object trellis.par.get trellis.par.set update.trellis wireframe xyplot cov.mcd cov.mve cov.rob lmsreg lqs ltsreg abbey accdeaths addterm Aids2 Animals anorexia anova.loglm anova.negbin area austres bacteria bandwidth.nrd bcv beav1 beav2 biopsy biplot.correspondence birthwt Boston boxcox cabbages caith Cars93 cats cement chem coef.fitdistr coef.lda coef.loglm con2tr confint confint.profile.glm confint.profile.nls contr.sdif coop corresp cov.trob cpus crabs Cushings DDT deaths denumerate dose.p drivers dropterm eagles epil eqscplot extractAIC.loglm extractAIC.polr family.negbin farms fdeaths fgl fitdistr fitted.loglm forbes fractions GAGurine galaxies gamma.dispersion gamma.shape gehan genotype geyser gilgais ginv glm.convert glm.nb glmmPQL heart hills hist.FD hist.scott housing huber hubers immer Insurance isoMDS kde2d lda ldahist leuk lh lm.gls lm.ridge lmwork loglm loglm1 logtrans mammals Math.fractions mca mcycle mdeaths Melanoma menarche michelson minn38 model.frame.lda model.frame.polr model.frame.qda motors muscle mvrnorm negative.binomial newcomb nlschools nottem npk npr1 Null oats OME Ops.fractions painters pairs.lda parcoord petrol Pima.te Pima.tr Pima.tr2 polr profile.glm psi.bisquare psi.hampel psi.huber qda quine Rabbit rational renumerate residuals.loglm rlm rms.curv rnegbin road rock rotifer Rubber sammon select Shepard ships shoes shrimp shuttle Sitka Sitka89 Skye snails SP500 stdres steam stepAIC stormer studres survey synth.te synth.tr t.fractions theta.md theta.ml theta.mm topo Traffic truehist ucv update.loglm UScereal UScrime VA vcov vcov.polr waders whiteside width.SJ write.matrix wtloss allGenerics as callGeneric callNextMethod Classes coerce dumpMethod dumpMethods existsFunction extends findFunction findMethod GenericFunctions getClass getClassDef getClasses getGenerics getMethod getMethods getValidity hasArg initialize is isClass isGeneric isGroup language LinearMethodsList MethodDefinition MethodDefinitionWithTrace MethodsList MethodsListSelect new promptClass promptMethods removeClass removeGeneric removeMethod removeMethods representation resetClass selectMethod setAs setClass setGeneric setGroupGeneric setIs setMethod setReplaceMethod setSClass setValidity show showMethods signature signature slot slotNames standardGeneric traceable validObject VIRTUAL __ClassMetaData gam gam.check gam.control gam.fit gam.models gam.nbut gam.parser gam.selection gam.setup gam.side.conditions GAMsetup get.family mgcv mono.con neg.binom null.space.basis.labels null.space.basis.powers null.space.dimension pcls persp.gam QT residuals.gam s SANtest theta.maxl uniquecombs anova.loess ksmooth loess loess.control loess.smooth ppr rock scatter.smooth smooth.spline supsmu ability.cov biplot biplot.princomp cancor cmdscale cut.dendrogram cutree dist factanal factanal.fit.mle Harman23.cor Harman74.cor hclust identify.hclust kmeans loadings names.dist plclust plotNode plotNodeLimit prcomp princomp promax rect.hclust screeplot varimax ACF ACF.gls ACF.lme AIC.gls AIC.lme AIC.lmList AIC.nlme AIC.nls Alfalfa allCoef anova.gls anova.lme asOneFormula Assay asTable augPred balancedGrouped bdf BIC BIC.logLik BIC.nlme BIC.nls BIC.nlsList BodyWeight Cefamandole coef.corAR1 coef.corARMA coef.corARMAd coef.corCAR1 coef.corCompSymm coef.corHF coef.corIdent coef.corLin coef.corNatural coef.corSpatial coef.corSpher coef.corStruct coef.corSymm coef.gls coef.gnls coef.lme coef.lmList coef.modelStruct coef.pdBlocked coef.pdCompSymm coef.pdDiag coef.pdIdent coef.pdMat coef.pdNatural coef.pdSymm coef.reStruct coef.summary.nlsList coef.varComb coef.varConstPower coef.varExp coef.varFixed coef.varFunc coef.varIdent coef.varPower collapse collapse.groupedData compareFits comparePred contr.SAS corAR1 corARMA corCAR1 corClasses corCompSymm corExp corFactor corFactor.compSymm corFactor.corAR1 corFactor.corARMA corFactor.corCAR1 corFactor.corNatural corFactor.corSpatial corFactor.corStruct corFactor.corSymm corGaus corIdent corLin corMatrix corMatrix.compSymm corMatrix.corAR1 corMatrix.corARMA corMatrix.corCAR1 corMatrix.corCompSymm corMatrix.corIdent corMatrix.corNatural corMatrix.corSpatial corMatrix.corStruct corMatrix.corSymm corMatrix.pdBlocked corMatrix.pdCompSymm corMatrix.pdDiag corMatrix.pdIdent corMatrix.pdMat corMatrix.pdSymm corMatrix.reStruct corNatural corRatio corSpatial corSpher corSymm Dialyzer Dim Dim.corSpatial Dim.corStruct Dim.default Dim.pdCompSymm Dim.pdDiag Dim.pdIdent Dim.pdMat Dim.pdNatural Dim.pdSymm Earthquake ergoStool Fatigue fdHess fitted.gls fitted.glsStruct fitted.gnls fitted.gnlsStruct fitted.lme fitted.lmeStruct fitted.lmList fitted.nlmeStruct fixed.effects fixed.effects.lme fixed.effects.lmList fixef fixef.lme fixef.lmList formula.corStruct formula.gls formula.gnls formula.groupedData formula.lme formula.lmList formula.modelStruct formula.nlme formula.nlsList formula.pdBlocked formula.pdMat formula.reStruct formula.varComb formula.varFunc gapply Gasoline getCovariate getCovariate.corSpatial getCovariate.corStruct getCovariate.data.frame getCovariate.varFunc getCovariateFormula getData getData.gls getData.gnls getData.lme getData.lmList getData.nlme getData.nls getGroups getGroups.corStruct getGroups.data.frame getGroups.gls getGroups.lme getGroups.lmList getGroups.varFunc getGroupsFormula getResponse getResponse.data.frame getResponse.gls getResponse.lme getResponse.lmList getResponseFormula getVarCov gls glsControl glsObject glsStruct Glucose Glucose2 gnls gnlsControl gnlsObject gnlsStruct groupedData gsummary Gun IGF initialize initialize.corAR1 initialize.corARMA initialize.corCAR1 initialize.corCompSymm initialize.corHF initialize.corIdent initialize.corLin initialize.corNatural initialize.corSpatial initialize.corSpher initialize.corStruct initialize.corSymm initialize.glsStruct initialize.gnlsStruct initialize.lmeStruct initialize.reStruct initialize.varComb initialize.varConstPower initialize.varExp initialize.varFixed initialize.varFunc initialize.varIdent initialize.varPower intervals intervals.gls intervals.lme intervals.lmList isBalanced isInitialized isInitialized.reStruct LDEsysMat lme lme.groupedData lme.lmList lmeControl lmeObject lmeScale lmeStruct lmList lmList.groupedData logDet logDet.corIdent logDet.corStruct logDet.pdBlocked logDet.pdCompSymm logDet.pdDiag logDet.pdIdent logDet.pdMat logDet.pdNatural logDet.pdSymm logDet.reStruct logLik.corStruct logLik.gls logLik.glsStruct logLik.gnls logLik.gnlsStruct logLik.lme logLik.lmeStruct logLik.lmeStructInt logLik.lmList logLik.reStruct logLik.varComb logLik.varFunc Machines MathAchieve MathAchSchool Meat MEdecomp MEdims MEEM MEestimate Milk model.matrix.reStruct Muscle Names Names.formula Names.listForm Names.pdBlocked Names.pdMat Names.reStruct needUpdate needUpdate.corStruct needUpdate.default needUpdate.modelStruct needUpdate.reStruct needUpdate.varComb needUpdate.varIdent nfGroupedData Nitrendipene nlme nlme.nlsList nlmeControl nlmeObject nlmeStruct nlsList nlsList.selfStart nmGroupedData Oats Orthodont Ovary Oxboys Oxide pairs.compareFits pairs.lme pairs.lmList PBG pdBlocked pdClasses pdCompSymm pdConstruct pdConstruct.pdBlocked pdConstruct.pdCompSymm pdConstruct.pdDiag pdConstruct.pdIdent pdConstruct.pdLogChol pdConstruct.pdMat pdConstruct.pdNatural pdConstruct.pdSymm pdDiag pdFactor pdFactor.reStruct pdIdent pdLogChol pdMat pdMatrix pdMatrix.reStruct pdNatural pdSymm Phenobarb phenoModel Pixel pooledSD pruneLevels qqnorm.gls qqnorm.lm qqnorm.lme qqnorm.lmList qqnorm.nls Quinidine quinModel Rail random.effects random.effects.lme random.effects.lmList ranef ranef.lme ranef.lmList RatPupWeight recalc recalc.corAR1 recalc.corARMA recalc.corCAR1 recalc.corCompSymm recalc.corHF recalc.corIdent recalc.corNatural recalc.corSpatial recalc.corStruct recalc.corSymm recalc.modelStruct recalc.reStruct recalc.varFunc recalc.varIdent Relaxin Remifentanil residuals.gls residuals.glsStruct residuals.gnls residuals.gnlsStruct residuals.lme residuals.lmeStruct residuals.lmList residuals.nlmeStruct reStruct simulate.lme solve.pdBlocked solve.pdDiag solve.pdIdent solve.pdLogChol solve.pdMat solve.pdNatural solve.pdSymm solve.reStruct Soybean splitFormula Spruce Tetracycline1 Tetracycline2 update.corStruct update.gls update.gnls update.groupedData update.lme update.lmList update.modelStruct update.nlme update.nlsList update.reStruct update.varComb update.varConstPower update.varExp update.varExpon update.varFunc update.varPower varClasses varComb varConstPower VarCorr varExp varFixed varFunc varIdent Variogram Variogram.corExp Variogram.corGaus Variogram.corLin Variogram.corRatio Variogram.corSpatial Variogram.corSpher Variogram.default Variogram.gls Variogram.lme varPower varWeights varWeights.glsStruct varWeights.lmeStruct varWeights.varComb varWeights.varFunc Wafer Wheat Wheat2 AIC.nls anova.nls anovalist.nls asOneSidedFormula BOD ChickWeight clearNames CO2 coef.nls deviance.nls df.residual.nls DNase fitted.nls formula.nls getInitial Indometh Loblolly logLik.nls nls nls.control nlsModel NLSstAsymptotic NLSstClosestX NLSstLfAsymptote NLSstRtAsymptote numericDeriv Orange profile.nls profiler profiler.nls Puromycin residuals.nls selfStart selfStart.default selfStart.formula setNames sortedXyData SSasymp SSasympOff SSasympOrig 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