Releases: ICGC-TCGA-PanCancer/PCAP-core
Releases · ICGC-TCGA-PanCancer/PCAP-core
Initial stable(ish) release
Please see the later releases, an bug was identified in the tests which prevented installation without manual intervention.
Basic tool bam_to_sra_xml.pl
for GNOS submission file generation should be stable for use. Some additional output files may be added to aid ID tracking later.
Reference implementation bwa mem in bwa_mem.pl
has been updated for 0.7.7 release of bwa.
setup.sh
script added to perform installation of all C programs required for any of the tools used in this package.