v0.50.0

• Refactor the whole file structure of pipeline-tools so it's easier to add more pipelines.

v0.49.1

• Update to metadata-api library release/1.0b15

v0.49.0

• Update metadata schema when formatting analysis results:
  • Change process/protocol_type to type
  • Change file_format to format

v0.48.3

• Update version of dcp cli to use at least version 5.1.0, which includes a fix for uploading large files

v0.48.2

• Comment out conditions for checking jenkins tests in pull approve
• Add snyk check
• Add security.txt file to indicate where security issues should be logged
• Update and add settings for the linting test
• Pass empty drops output to submit wdl

v0.48.1

• Fix payload for adding file references via the ingestion service API

v0.48.0

• Remove the outputs field from the analysis_process metadata generated by the pipelines.

v0.47.0

• Update the adapter workflow for Optimus pipeline, tested with 4k_pbmc dataset.

v0.46.2

• Update format of the Cromwell url used to fetch metadata
• Replace deprecated setup.py dependency_links
• Remove unused Cromwell metadata docker folder

v0.46.1

• Standardize Cromwell timestamps to follow the date-time format required by the analysis process JSON schema