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"""Node type set definitions and software resolution.
Every workflow node type belongs to exactly one set, which determines how
the engine dispatches it (HPC submission, local execution, analysis, etc.).
"""
__all__ = [
"VASP_CALC_NODES",
"UNIFIED_CALC_NODES",
"LOCAL_NODES",
"MLP_NODES",
"XTB_NODES",
"SELLA_NODES",
"CP2K_NODES",
"LAMMPS_NODES",
"BUILD_NODES",
"POLYMER_SIM_NODES",
"ORCA_CALC_NODES",
"GAUSSIAN_CALC_NODES",
"GROMACS_NODES",
"QE_CALC_NODES",
"QCHEM_CALC_NODES",
"AMBER_NODES",
"KMC_NODES",
"ANALYSIS_NODES",
"HPC_ANALYSIS_NODES",
"get_engine_for_node",
]
# Node types that produce VASP calculations
VASP_CALC_NODES = {
"vasp_relax", "vasp_static", "vasp_md", "bulk_opt", "slab_relax",
"frequency", "electronic", "reference_mol", "slow_growth", "vasp_neb",
}
# Unified node types (software chosen by params.software)
UNIFIED_CALC_NODES = {"geo_opt", "single_point", "cell_opt", "md", "md_minimize", "freq", "ts_search", "irc", "uvvis", "neb"}
# Node types that are handled locally (no HPC submission)
LOCAL_NODES = {
"structure_input", "structure_list_input", "slab_gen", "adsorbate_place",
"batch_adsorbate_place",
"condition", "loop", "merge",
# NOTE: free_energy is routed via ANALYSIS_NODES (its handler lives in
# workflow.engines.analysis.execute_analysis_node, not local.py). Keeping it
# out of LOCAL_NODES avoids the no-op path that marked it COMPLETED with no
# result (which silently broke every recipe ending in free_energy).
"gibbs_energy",
# export_data is handled by workflow.engines.local (node_type=="export_data")
# but was missing from this set, so it routed to "unknown".
"export_data",
# High-throughput screening nodes (local orchestration)
"batch_generate", "batch_slab_gen", "batch_coverage_gen", "map", "aggregate",
}
# Node types that use ML potentials (submitted as HPC jobs too)
MLP_NODES = {"mlp_relax", "mlp_md", "mlp_single_point", "mlp_vibrations", "mlp_neb"}
# Node types that use xTB (semi-empirical, submitted as HPC jobs)
XTB_NODES = {"xtb_relax", "xtb_static"}
# Node types that use Sella (transition state search, submitted as HPC jobs)
SELLA_NODES = {"sella_ts"}
# Node types that produce CP2K calculations (submitted as HPC jobs)
CP2K_NODES = {"cp2k_geopt", "cp2k_static", "cp2k_cellopt", "cp2k_md", "cp2k_freq"}
# Node types that use LAMMPS (submitted as HPC jobs)
LAMMPS_NODES = {"lammps_md", "lammps_minimize", "polymer_md"}
# Node types that build/transform structures locally (no HPC)
BUILD_NODES = {
"defect_gen", "supercell_gen", "strain_deform", "doping_gen",
"intercalation", "heterostructure_build", "nanotube_build",
"water_solvate", "passivate",
"polymer_build", "polymer_crosslink",
}
# Polymer nodes that run LAMMPS locally or on HPC
POLYMER_SIM_NODES = {"polymer_deform", "glass_transition"}
# Node types that use ORCA (quantum chemistry, submitted as HPC jobs)
ORCA_CALC_NODES = {"orca_opt", "orca_sp", "orca_freq", "orca_neb_ts", "orca_irc", "orca_uvvis"}
# Node types that use Gaussian (quantum chemistry, submitted as HPC jobs)
GAUSSIAN_CALC_NODES = {"gaussian_opt", "gaussian_sp", "gaussian_freq"}
# Node types that use GROMACS (classical MD, submitted as HPC jobs)
GROMACS_NODES = {"gromacs_md", "gromacs_minimize"}
# Node types that use Quantum ESPRESSO (submitted as HPC jobs)
QE_CALC_NODES = {"qe_scf", "qe_relax", "qe_bands", "qe_dos", "qe_phonon"}
# Node types that use Q-Chem (quantum chemistry, submitted as HPC jobs)
QCHEM_CALC_NODES = {"qchem_static", "qchem_opt", "qchem_ts"}
# Node types that use AMBER (ML/MM, classical MD, submitted as HPC jobs)
AMBER_NODES = {"amber_md", "amber_minimize"}
# Node types that use KMC (Kinetic Monte Carlo, submitted as HPC jobs)
KMC_NODES = {"kmc"}
# Node types that perform analysis locally
ANALYSIS_NODES = {
"dos_analysis", "cohp_analysis", "md_analysis",
"charge_analysis",
"phonon_analysis", "eos_analysis", "elastic_analysis",
"surface_energy", "wulff_construction", "adsorption_energy",
"coverage_analysis",
# Post-processing nodes whose handlers already live in
# workflow.engines.analysis.execute_analysis_node but were never listed
# here, so the scanner routed them to "unknown" and templates using them
# could not run.
"convergence_check", "energy_compare", "pick_best", "her_analysis",
# free_energy builds the reaction free-energy diagram from upstream
# freq/energy results; its handler is in execute_analysis_node. It used to
# sit in LOCAL_NODES (→ no-op COMPLETED, empty result), breaking every
# recipe (HER/OER/ORR/NRR/CO2RR) whose final node is free_energy.
"free_energy",
# Generic passthrough for unmapped/blank analysis kinds (see _resolve_software).
"analysis_passthrough",
}
# HPC analysis nodes (currently empty — charge_analysis moved to ANALYSIS_NODES
# because it is post-processing that reads existing HPC output, not a new HPC job)
HPC_ANALYSIS_NODES: set[str] = set()
# A generic "analysis" node carries the concrete kind in params["type"]; map it
# to the specific analysis node whose handler already exists in
# workflow.engines.analysis. Without this, templates that use an `analysis` node
# (elastic / phonon / EOS / trajectory / surface energy) routed to "unknown".
_ANALYSIS_TYPE_MAP = {
"elastic": "elastic_analysis",
"phonon": "phonon_analysis",
"eos": "eos_analysis",
"trajectory_analysis": "md_analysis",
"trajectory": "md_analysis",
"md": "md_analysis",
"dos": "dos_analysis",
"cohp": "cohp_analysis",
"charge": "charge_analysis",
"bader": "charge_analysis",
"surface_energy": "surface_energy",
"wulff": "wulff_construction",
"adsorption_energy": "adsorption_energy",
"coverage": "coverage_analysis",
}
def _resolve_software(node_type: str, params: dict[str, object]) -> tuple[str, str]:
"""For unified nodes, resolve (effective_node_type, software) from params.
Consults declarative engine specs first, then falls back to hardcoded map
for engines not yet migrated to YAML.
"""
if node_type == "analysis":
atype = str(params.get("type", "")).lower()
mapped = _ANALYSIS_TYPE_MAP.get(atype)
if mapped:
return mapped, ""
# Unmapped analysis kind (e.g. a teaching template with type="re-optimize"
# or a blank type) → generic passthrough that echoes upstream results,
# so the node completes locally with real data instead of falling through
# to the HPC submitter ("No HPC connection available").
return "analysis_passthrough", ""
if node_type not in UNIFIED_CALC_NODES:
return node_type, ""
software = str(params.get("software", "vasp"))
# 1. Try declarative engine runtime
try:
from workflow.engine_runtime import build_unified_calc_map
declarative_map = build_unified_calc_map()
resolved = declarative_map.get((node_type, software))
if resolved:
return resolved, software
except Exception:
pass
# 2. Fallback: hardcoded map for engines not yet migrated
_legacy_map: dict[tuple[str, str], str] = {
("geo_opt", "vasp"): "vasp_relax",
("geo_opt", "cp2k"): "cp2k_geopt",
("geo_opt", "orca"): "orca_opt",
("geo_opt", "xtb"): "xtb_relax",
("geo_opt", "mlp"): "mlp_relax",
("single_point", "vasp"): "vasp_static",
("single_point", "cp2k"): "cp2k_static",
("single_point", "orca"): "orca_sp",
("single_point", "xtb"): "xtb_static",
("single_point", "mlp"): "mlp_single_point",
("freq", "mlp"): "mlp_vibrations",
("neb", "vasp"): "vasp_neb",
("neb", "mlp"): "mlp_neb",
("ts_search", "mlp"): "mlp_neb",
("cell_opt", "vasp"): "bulk_opt",
("cell_opt", "cp2k"): "cp2k_cellopt",
("cell_opt", "mlp"): "mlp_relax",
("md", "vasp"): "vasp_md",
("md", "cp2k"): "cp2k_md",
("md", "lammps"): "lammps_md",
("md", "gromacs"): "gromacs_md",
("md", "amber"): "amber_md",
("md", "mlp"): "mlp_md",
("md_minimize", "lammps"): "lammps_minimize",
("md_minimize", "gromacs"): "gromacs_minimize",
("md_minimize", "amber"): "amber_minimize",
("md_minimize", "mlp"): "mlp_relax",
("freq", "vasp"): "frequency",
("freq", "cp2k"): "cp2k_freq",
("freq", "orca"): "orca_freq",
("freq", "gaussian"): "gaussian_freq",
("geo_opt", "amber"): "amber_minimize",
("geo_opt", "gaussian"): "gaussian_opt",
("single_point", "gaussian"): "gaussian_sp",
("ts_search", "sella"): "sella_ts",
("ts_search", "orca"): "orca_neb_ts",
("irc", "orca"): "orca_irc",
("uvvis", "orca"): "orca_uvvis",
}
resolved = _legacy_map.get((node_type, software))
if resolved:
return resolved, software
return node_type, software
def get_engine_for_node(node_type: str) -> str:
"""Return the engine key for a given resolved node type.
Returns one of: 'vasp', 'cp2k', 'mlp', 'xtb', 'sella', 'lammps',
'orca', 'gaussian', 'gromacs', 'local', 'analysis', 'hpc_analysis',
'build', 'polymer_sim', or 'unknown'.
"""
if node_type in VASP_CALC_NODES:
return "vasp"
if node_type in CP2K_NODES:
return "cp2k"
if node_type in MLP_NODES:
return "mlp"
if node_type in XTB_NODES:
return "xtb"
if node_type in SELLA_NODES:
return "sella"
if node_type in LAMMPS_NODES:
return "lammps"
if node_type in ORCA_CALC_NODES:
return "orca"
if node_type in GAUSSIAN_CALC_NODES:
return "gaussian"
if node_type in GROMACS_NODES:
return "gromacs"
if node_type in QE_CALC_NODES:
return "qe"
if node_type in QCHEM_CALC_NODES:
return "qchem"
if node_type in AMBER_NODES:
return "amber"
if node_type in KMC_NODES:
return "kmc"
if node_type in LOCAL_NODES:
return "local"
if node_type in ANALYSIS_NODES:
return "analysis"
if node_type in HPC_ANALYSIS_NODES:
return "hpc_analysis"
if node_type in BUILD_NODES:
return "build"
if node_type in POLYMER_SIM_NODES:
return "polymer_sim"
return "unknown"