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DESCRIPTION
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DESCRIPTION
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Package: tocelldb
Title: Customize your specific organism cellchatdb
Version: 1.0.1
Authors@R:
person("Dave", "Hall", , "halldave1996@gmail.com", role = c("aut", "cre"))
Description: While you might feel confused when you have no idea about dealing with cell communication analysis, it is because you do not possess a specific cellchat database of your own organism. Normally, this can only be done in humans or mice, or by matching homologous genes in your species. Now we provide a method that utilizes STRINGdb to predict interactions of your specific species as long as it has a reference genome. Alternatively, if you input a DGE list, we could assist you in predicting interactions and determining the reasons behind differential gene expression!
License: MIT + file LICENSE
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1.9000
Imports:
CellChat,
dplyr,
rtracklayer,
stringr,
utils
Suggests:
testthat (>= 3.0.0)
Config/testthat/edition: 3