HT Genome Analysis Unit
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nf-pipeline-regenie
nf-pipeline-regenie PublicGWAS and rare variants tests at high speed using regenie
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rsid_tools
rsid_tools PublicSmall utilities to play with dbSNP rsID: annotate rsID for a var or get position for an rsID
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csq_selector
csq_selector PublicFilter and select variant consequence annotations from snpEff, VEP or bcftools
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nim-simpleargs
nim-simpleargs PublicA simple command line argument parser with minimum dependencies
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Repositories
- h5ad_clean_annotate Public
A small tool that help in cleaning, subsetting and annotation h5ad file efficiently.
HTGenomeAnalysisUnit/h5ad_clean_annotate’s past year of commit activity - snpboost Public Forked from hklinkhammer/snpboost
An algorithm to apply statistical boosting on genotype data via a batch-based approach.
HTGenomeAnalysisUnit/snpboost’s past year of commit activity - nf-core-modules Public Forked from nf-core/modules
fork of nf-core modules. Repository to host tool-specific module files for the Nextflow DSL2 community!
HTGenomeAnalysisUnit/nf-core-modules’s past year of commit activity - scrnaseq Public Forked from nf-core/scrnaseq
Single-cell RNA-Seq pipeline for barcode-based protocols such as 10x, DropSeq or SmartSeq, offering a variety of aligners and empty-droplet detection
HTGenomeAnalysisUnit/scrnaseq’s past year of commit activity - nf_core_configs Public Forked from nf-core/configs
Config files used to define parameters specific to compute environments at different Institutions
HTGenomeAnalysisUnit/nf_core_configs’s past year of commit activity
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