Evaluating the residual motion and analytic insights on fMRI connectome and visualise reports.
The project is based on the code of SIMEXP/fmriprep-denoise-benchmark and the publication by Wang et al. 2024.
This project is in alpha stage! This is not a stable project yet.
- Install the optional dependency:
pip install "wonkyconn[textual]". - Launch the GUI instead of running headless:
wonkyconn --textual. - The GUI requires an interactive terminal (TTY). If you are running inside a non-interactive job (for example, on an HPC batch node), run the CLI without
--textualinstead. - All required inputs are collected in the GUI; existing CLI defaults and behavior are preserved once you click Run.
- Migrate the code from https://github.com/SIMEXP/fmriprep-denoise-benchmark
- Add test data
- Figure out how many confound regressors were used (should this be part of the BIDS metadata)