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@GMOD

Generic Model Organism Database Project

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  1. Chado Chado Public

    the GMOD database schema

    PLpgSQL 41 23

  2. jbrowse-components jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    TypeScript 235 66

  3. jbrowse jbrowse Public

    JBrowse 1, a full-featured genome browser built with JavaScript and HTML5. For JBrowse 2, see https://github.com/GMOD/jbrowse-components.

    JavaScript 469 199

  4. Apollo Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    Groovy 132 85

Repositories

Showing 10 of 104 repositories
  • Apollo Public

    Genome annotation editor with a Java Server backend and a Javascript client that runs in a web browser as a JBrowse plugin.

    GMOD/Apollo’s past year of commit activity
    Groovy 132 85 239 (5 issues need help) 1 Updated Apr 30, 2025
  • jbrowse-components Public

    Source code for JBrowse 2, a modern React-based genome browser

    GMOD/jbrowse-components’s past year of commit activity
    TypeScript 235 Apache-2.0 66 266 (3 issues need help) 24 Updated Apr 30, 2025
  • vcf-js Public

    High performance Variant Call Format (VCF) parser in pure JavaScript

    GMOD/vcf-js’s past year of commit activity
    TypeScript 24 MIT 5 2 1 Updated Apr 30, 2025
  • cram-js Public

    Read CRAM v3 and v2 in node or in the browser

    GMOD/cram-js’s past year of commit activity
    TypeScript 18 MIT 9 8 1 Updated Apr 30, 2025
  • Apollo3 Public

    JBrowse 2 plugin for editing annotations on an Apollo server

    GMOD/Apollo3’s past year of commit activity
    TypeScript 11 Apache-2.0 4 63 10 Updated Apr 30, 2025
  • react-msaview Public

    A multiple sequence alignment viewer

    GMOD/react-msaview’s past year of commit activity
    TypeScript 20 MIT 2 25 0 Updated Apr 30, 2025
  • generic-filehandle2 Public

    modernization of the original generic-filehandle, no Buffer polyfill needed

    GMOD/generic-filehandle2’s past year of commit activity
    TypeScript 0 0 0 0 Updated Apr 30, 2025
  • indexedfasta-js Public

    Read FASTA files indexed with .fai indexes. Also supports BGZIP+.gzi

    GMOD/indexedfasta-js’s past year of commit activity
    TypeScript 12 MIT 4 0 0 Updated Apr 30, 2025
  • abortable-promise-cache Public

    add AbortController support to a cache of async requests

    GMOD/abortable-promise-cache’s past year of commit activity
    TypeScript 6 MIT 2 1 5 Updated Apr 30, 2025
  • nclist-js Public

    Read JBrowse v1 nested containment list feature stores from modern JS

    GMOD/nclist-js’s past year of commit activity
    TypeScript 0 MIT 0 0 1 Updated Apr 30, 2025
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