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Utilities

This is a collection of utilities for processing a dataset. Currently, it includes the following tool:

datalisting.py

Prepare a table of file paths and filenames that match the given file types in the specified directory and its subdirectories.

image_slicer.py

The module for processing slide images and exporting region images. It prepares a grid map for each subfolder with *.mrxs files in the given path and saves the map image and each element of the slide map(grid) in the highest possible quality.

load_data_by_list.py

Load data from a data list file and copy files to corresponding dataclass subdirectories in the export directory.

renamer.py

This tool is intended for renaming the dataset folders using regular expressions (regex). It can be used to automate the renaming process of a large number of folders in a dataset.

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Collection of utilities for processing a dataset

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