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@Emergent-Epidemics

Emergent Epidemics Lab

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  1. H5N1_US2024_timeline H5N1_US2024_timeline Public

    Data associated with the timeline of events during the 2024 H5N1 outbreak in the United States

    28

  2. covid19_npi_china covid19_npi_china Public

    Code for: The effect of human mobility and control measures on the COVID-19 epidemic in China

    Jupyter Notebook 21 11

  3. infectious_disease_predictability infectious_disease_predictability Public

    Code and data for On the Predictability of Infectious Disease Outbreaks by SV Scarpino & G Petri

    TeX 17 8

  4. Emergent_Epidemics_Lab_nCoV2019 Emergent_Epidemics_Lab_nCoV2019 Public

    An RShiny App for mapping nCoV2019 line list data

    R 9 4

  5. Puerto_Rico_Arbovirus_Data Puerto_Rico_Arbovirus_Data Public

    Arbovirus and dengue data from Puerto Rico

    R 8 1

  6. beyond_R0 beyond_R0 Public

    Code and data for final epidemic size calculations

    R 6

Repositories

Showing 10 of 23 repositories
  • world_bank_health_indicators Public

    Indicators for governance (2022) and health (2022) from the World Bank

    Emergent-Epidemics/world_bank_health_indicators’s past year of commit activity
    0 MIT 0 0 0 Updated Oct 30, 2024
  • H5N1_US2024_timeline Public

    Data associated with the timeline of events during the 2024 H5N1 outbreak in the United States

    Emergent-Epidemics/H5N1_US2024_timeline’s past year of commit activity
    28 0 1 0 Updated Jul 17, 2024
  • COVID_Mexico Public

    Analyses of COVID-19 data from Mexico

    Emergent-Epidemics/COVID_Mexico’s past year of commit activity
    R 0 MIT 0 0 0 Updated May 28, 2024
  • USDA_cattle_data Public
    Emergent-Epidemics/USDA_cattle_data’s past year of commit activity
    R 0 MIT 0 0 0 Updated May 10, 2024
  • wastewater_scan_analysis Public

    Analysis of wastewater scan pathogen surveillance data

    Emergent-Epidemics/wastewater_scan_analysis’s past year of commit activity
    R 0 MIT 0 0 0 Updated Mar 10, 2023
  • pathogen_containment Public

    Analysis of outbreak extinction probabilities

    Emergent-Epidemics/pathogen_containment’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jan 20, 2023
  • MA_COVID_wastewater Public

    Plotting wastewater surveillance data for SARS-CoV-2 in MA

    Emergent-Epidemics/MA_COVID_wastewater’s past year of commit activity
    R 0 MIT 0 0 0 Updated Jan 11, 2023
  • Ebola_SitReps_Uganda_2022 Public

    Digitizing Ebola SitReps from Uganda

    Emergent-Epidemics/Ebola_SitReps_Uganda_2022’s past year of commit activity
    R 5 MIT 1 0 0 Updated Dec 17, 2022
  • covid19_npi_china Public

    Code for: The effect of human mobility and control measures on the COVID-19 epidemic in China

    Emergent-Epidemics/covid19_npi_china’s past year of commit activity
    Jupyter Notebook 21 MIT 11 0 0 Updated Dec 1, 2022
  • eeid_mobility Public

    Analysis of Baidu mobility data for EEID

    Emergent-Epidemics/eeid_mobility’s past year of commit activity
    R 1 MIT 2 0 0 Updated Jun 6, 2022
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