You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I finally have some time to do this! One question though: the update of xml file has to be done manually right? Before starting doing it by hand I wanted to make sure I wasn't doing something useless :)
Hmm, we did it in the old Bexis by creating a dataset. There you could add data structure parts, and afterwards, they were in the XML. The problem is, with BEXIS2 software, the data structure is independent of the metadata. I think we should it provide here in a way that it can be used within BExIS, right?
Then, I need to speak with people about how to do it.
Ah, ok, I see! Yes, I would say that it's better if it can be used within BExIS. If this takes very long to implement it, in the meantime we could make a new .csv file with the updates and make it available either as a dataset or simply as a download document. Not sure how many people would need it in a short time.
Thanks for looking into this, Caterina. Another possibility could be to write a script in Open Refine to produce a suitable xml for BExIS, similar to what @DavidFichtmueller prepared for the OWL file for GFBio. see the procedure for updates described here: https://github.com/EcologicalTraitData/ETS/tree/master/gfbio
for integration with BEXIS2
update xml file in https://github.com/EcologicalTraitData/ETS/blob/master/bexis/traitTemplate.xml to reflect changes made in v0.10
see: https://terminologies.gfbio.org/terms/ets/pages/VERSIONS.html
refer to source file: https://github.com/EcologicalTraitData/ETS/blob/master/ETS.csv
The text was updated successfully, but these errors were encountered: