File tree Expand file tree Collapse file tree 1 file changed +6
-11
lines changed Expand file tree Collapse file tree 1 file changed +6
-11
lines changed Original file line number Diff line number Diff line change @@ -22,22 +22,17 @@ utils: libs
22
22
cd src/parasol && ${MAKE}
23
23
./src/utils/userApps/mkREADME.sh ${DESTDIR} /${BINDIR} ${CURDIR} /kentUtils.Documentation.txt
24
24
25
- libs : installEnvironment
25
+ libs : fetchSamtabix installEnvironment
26
26
cd samtabix && ${MAKE}
27
27
cd src && ${MAKE} libs
28
28
29
29
clean :
30
30
test ! -d src || (cd src && ${MAKE} -i -k clean)
31
-
32
- fetchSource :
33
31
rm -fr samtabix
34
- /bin/echo " fetch samtabix" 1>&2
35
- git clone http://genome-source.cse.ucsc.edu/samtabix.git samtabix > /dev/null 2>&1
36
- test -d .git || git clone https://github.com/ENCODE-DCC/kentUtils.git .
37
- @/bin/echo -n " size of fetched kent source tree: "
38
- @du -hs src
39
- @/bin/echo -n " number of files in kent source tree: "
40
- @find ./src -type f | wc -l
32
+
33
+ fetchSamtabix :
34
+ test -d samtabix || /bin/echo " git clone fetch samtabix" 1>&2
35
+ test -d samtabix || git clone http://genome-source.cse.ucsc.edu/samtabix.git samtabix
41
36
42
37
# this installEnvironment will add all the shell environment variables
43
38
# to the src/inc/localEnvironment.mk file which is included
@@ -47,7 +42,7 @@ fetchSource:
47
42
# recognize the '-e' argument
48
43
49
44
installEnvironment :
50
- @/bin/ echo -e " export DESTDIR = ${DESTDIR} \n\
45
+ @echo -e " export DESTDIR = ${DESTDIR} \n\
51
46
export BINDIR = ${BINDIR}\n\
52
47
export MACHTYPE = ${MACHTYPE}\n\
53
48
export CGI_BIN = ${CGI_BIN}\n\
You can’t perform that action at this time.
0 commit comments