fix error logs handling repeat RTs

Author: wkew

corems/mass_spectra/input/rawFileReader.py

@@ -992,7 +992,8 @@ def get_error_logs(self):
             error_log_item = self.iRawDataPlus.GetErrorLogItem(i)
             rt = error_log_item.RetentionTime
             message = error_log_item.Message
-            error_logs[rt] = message
+            # Use the index `i` as the unique ID key
+            error_logs[i] = {'rt': rt, 'message': message}
         return error_logs
 
 

tests/test_input.py

@@ -363,7 +363,7 @@ def test_import_thermo_parse_metadata():
 
     # Read the error logs
     error_logs = parser.get_error_logs()
-    assert error_logs[0.0] == 'Activation type: ETD'
+    assert error_logs[0]['message'] == 'm/z: 202.00000'
 
     # Read the sample information
     sampleinfo = parser.get_sample_information()
@@ -372,4 +372,4 @@ def test_import_thermo_parse_metadata():
     # Close the file
     parser.close_file()
     assert parser.iRawDataPlus.get_IsOpen() == False
-    
+