Add facet to select secondary analysis workflow type #548
Description
A project (or any user selection of facets) could contain secondary analysis files from different workflows (e.g. Optimus vs Cellranger vs SS2).
The user should be able to filter on any one of these before requesting the Matrix Service.
The metadata is available in analysis_protocol:
For Optimus it looks like:
{
"computational_method": "Optimus",
"describedBy": "https://schema.integration.data.humancellatlas.org/type/protocol/analysis/8.0.7/analysis_protocol",
"protocol_core": {
"protocol_id": "optimus_v1.0.0"
},
"protocol_type": {
"text": "analysis"
},
"schema_type": "protocol",
"provenance": {
"document_id": "4de28c2b-7be2-4ed8-bd07-cef99cd0a10b",
"submission_date": "2019-04-09T22:45:00.828Z",
"update_date": "2019-04-09T22:45:05.852Z"
}
}
For cellranger it looks like:
{
"computational_method": "10x",
"describedBy": "https://schema.staging.data.humancellatlas.org/type/protocol/analysis/8.0.3/analysis_protocol",
"protocol_core": {
"protocol_id": "cellranger_v1.0.2"
},
"protocol_type": {
"text": "analysis"
},
"schema_type": "protocol",
"provenance": {
"document_id": "71470c53-1b86-4e6d-9707-55a0f70745a4",
"submission_date": "2019-02-14T19:15:10.720Z",
"update_date": "2019-02-14T19:15:15.466Z"
}
}
and for smartseq2:
{
"computational_method": "SmartSeq2SingleCell",
"describedBy": "http://schema.staging.data.humancellatlas.org/type/protocol/analysis/8.0.3/analysis_protocol",
"protocol_core": {
"protocol_id": "smartseq2_v2.1.0"
},
"protocol_type": {
"text": "analysis"
},
"schema_type": "protocol",
"provenance": {
"document_id": "7a56f120-c055-4b63-acdf-8cc80c3555c1",
"submission_date": "2018-10-24T23:35:47.320Z",
"update_date": "2018-10-24T23:35:51.714Z"
}
}