updated params

Author: mayhewsw

ner/src/main/java/edu/illinois/cs/cogcomp/ner/ParsingProcessingData/TaggedDataReader.java

@@ -75,7 +75,7 @@ public static NERDocument readFile(String path, String format, String documentNa
             res = BracketFileReader.read(path, documentName, cp);
         }else if (format.equals("-json")) {
             TextAnnotation ta = SerializationHelper.deserializeTextAnnotationFromFile(path, true);
-            res = TextAnnotationConverter.getNerDocument(ta);
+            res = TextAnnotationConverter.getNerDocument(ta, cp);
         } else {
             System.err.println("Fatal error: unrecognized file format: " + format);
             System.exit(0);

ner/src/main/java/edu/illinois/cs/cogcomp/ner/ParsingProcessingData/TextAnnotationConverter.java

@@ -4,9 +4,7 @@
 import edu.illinois.cs.cogcomp.core.datastructures.textannotation.*;
 import edu.illinois.cs.cogcomp.lbjava.nlp.Word;
 import edu.illinois.cs.cogcomp.lbjava.parse.LinkedVector;
-import edu.illinois.cs.cogcomp.ner.LbjTagger.Data;
-import edu.illinois.cs.cogcomp.ner.LbjTagger.NERDocument;
-import edu.illinois.cs.cogcomp.ner.LbjTagger.NEWord;
+import edu.illinois.cs.cogcomp.ner.LbjTagger.*;
 import org.jetbrains.annotations.NotNull;
 import org.slf4j.Logger;
 import org.slf4j.LoggerFactory;
@@ -42,7 +40,7 @@ public static Data loaddataFromTAs(List<TextAnnotation> tas) throws Exception {
      * @param ta a text annotation
      * @return NERDocument
      */
-    public static NERDocument getNerDocument(TextAnnotation ta) {
+    public static NERDocument getNerDocument(TextAnnotation ta, ParametersForLbjCode cp) {
         // convert this data structure into one the NER package can deal with.
         ArrayList<LinkedVector> sentences = new ArrayList<>();
         String[] tokens = ta.getTokens();
@@ -87,11 +85,11 @@ public static NERDocument getNerDocument(TextAnnotation ta) {
                 }
 
                 if (w.length() > 0) {
-                    //NEWord.addTokenToSentence(words, w, tag);
+                    NEWord.addTokenToSentence(words, w, tag, cp);
 
-                    NEWord word=new NEWord(new Word(w),null,tag);
+                    //NEWord word = new NEWord(new Word(w),null,tag);
 
-                    NEWord.addTokenToSentence(words, word);
+                    //NEWord.addTokenToSentence(words, word);
 
 
                     tokenindices[neWordIndex] = tokenIndex;