diff --git a/README.md b/README.md index f442225..a37c613 100644 --- a/README.md +++ b/README.md @@ -42,5 +42,8 @@ Run example: ``` docker run -v /home/user/raw:/data_input -i -t --user biodocker thermorawparser mono /home/biodocker/bin/bin/Debug/ThermoRawFileParser.exe -i=/data_input/raw_file.raw -o=/data_input/output/ -m -c=PXD00001 ``` - +or with the bash script (`ThermoRawFileParser.sh`): +``` +docker run -v /home/user/raw:/data_input -i -t --user biodocker thermorawparser /bin/bash /home/biodocker/bin/ThermoRawFileParser.sh -i=/data_input/raw_file.raw -o=/data_input/output/ -m -c=PXD00001 +```