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cice.setup
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#!/bin/csh -f
set ICE_SANDBOX = `pwd`
set ICE_VERSION = unknown
if (-e cicecore/version.txt) then
set ICE_VERSION = `head -1 cicecore/version.txt | sed -e 's/ /_/g'`
endif
set ICE_SCRIPTS = "${ICE_SANDBOX}/configuration/scripts"
set initargv = ( $argv[*] )
set helpheader = 0
set dash = "-"
set spval = "UnDeFiNeD"
set machcomp = ${spval}
set machine = ${spval}
set envnames = intel
set case = ${spval}
set test = ${spval}
set grid = gx3
set pesx = 4x1
set sets = ""
set tdir = ${spval}
set bdir = ${spval}
set testid = ${spval}
set testsuite = ${spval}
set queue = ${spval}
set acct = ${spval}
set baseCom = ${spval} # Baseline compare
set baseGen = ${spval} # Baseline generate
set bfbcomp = ${spval} # BFB compare
set report = 0 # test results reporting
set sdate = `date -u "+%y%m%d"`
set stime = `date -u "+%H%M%S"`
set docase = 0
set dotest = 0
set dosuite = 0
set coverage = 0 # code coverage measurement and reporting
set coverageflag = false
set suitebuild = true
set suitereuse = true
set suiterun = false
set suitesubmit = true
if ($#argv < 1) then
set helpheader = 1
endif
set argv = ( $initargv[*] )
# check for -h
while (1)
if ($#argv < 1) break;
if ("$argv[1]" =~ "-h" || "$argv[1]" =~ "--help") then
set helpheader = 2
if ("$argv[1]" == "-h") then
set helpheader = 1
endif
endif
shift argv
end
#------------------------------------------------------------
# Help output
if ( $helpheader > 0) then
cat << EOF1
NAME
cice.setup
SYNOPSIS
-h || --help
--version
--setvers versno
--case CASE -m MACH
[-e ENV][-p MxN][-g GRID][-s SET1,SET2][--acct ACCT]
--test TEST -m MACH --testid ID
[-e ENV][-p MxN][-g GRID][-s SET1,SET2][--acct ACCT]
[--diff TESTNAME][--bdir DIR][--bgen DIR][--bcmp DIR]
[--tdir PATH]
--suite SUITE[,SUITE2] -m MACH --testid ID
[-e ENV1,ENV2][--acct ACCT][--bdir DIR][--bgen DIR]
[--bcmp DIR][--tdir PATH][--report || --coverage]
[--setup-only || --setup-build || --setup-build-run || --setup-build-submit]
DESCRIPTION
--help, -h : help
--version : generates cice version number
--setvers : updates cice version number in sandbox
--case, -c : case, case directory/name (not with --test or --suite)
--mach, -m : machine, machine name (required)
--env, -e : compilation environment name(s), comma separated (default = $envnames)
--pes, -p : tasks x threads [x blocksize_x x blocksize_y [x maxblocks]] (default is ${pesx})
--acct : account number for the batch submission
--grid, -g : grid, grid (default = ${grid})
--set, -s : case option setting(s), comma separated (default = " ")
--queue : queue for the batch submission
For testing
--test : test, test name (not with --case or --suite)
--suite : test suite, pre-defined set or sets of tests, comma separated (not with --case or --test)
--tdir : directory name where tests will be located
--bdir : baseline directory for regression testing, default ICE_MACHINE_BASELINE
--bgen : directory name where output from current tests are copied
--bcmp : directory name where output from current tests are compared
--testid : test ID, user-defined id for testing (REQUIRED with --test or --suite)
--diff : generate comparison against another case
--report : automatically post results when tests are complete
--coverage : generate and report test coverage metrics when tests are complete,
requires GNU compiler (ie. normally ``--env gnu``)
--setup-only : for suite, setup testcases, no build, no submission
--setup-build : for suite, setup and build testcases, no submission
--setup-build-run : for suite, setup, build, and run interactively
--setup-build-submit : for suite, setup, build, and submit (default behavior)
EXAMPLES
cice.setup --version
cice.setup --setvers 6.0.2
cice.setup -c caseB -m gordon -e cray -s diag1,debug
cice.setup --case ~/caseA --mach cheyenne --env intel --set diag24
cice.setup --test restart -m onyx -e gnu -s debug -testid myid -p 8x4
cice.setup --suite base_suite -m conrad --env intel,cray --testid myv1 --bgen myv1
cice.setup --suite quick_suite,decomp_suite -m cheyenne --testid myv1 --bgen myv1
cice.setup --suite quick_suite -m cheyenne --testid myv2 --bgen myv2 --bcmp myv1
SEE ALSO
cice.setup --help or
User Documentation at https://github.com/cice-consortium/cice/
EOF1
if ($helpheader > 1) then
cat << EOF1
Available --mach and --env combinations are in configuration/scripts/machines and include:
EOF1
set soptions1 = `ls -1 configuration/scripts/machines | grep Macros | sed 's/Macros.//g' `
set soptions = `echo $soptions1 | fmt -1 | sort `
foreach sopt ($soptions)
echo " $sopt"
end
cat << EOF1
Available --set options are in configuration/scripts/options and include:
EOF1
set soptions1 = `ls -1 configuration/scripts/options | grep set_ | sed 's/set_nml.//g' | sed 's/set_env.//g' | sed 's/set_files.//g' `
set soptions = `echo $soptions1 | fmt -1 | sort -u `
foreach sopt ($soptions)
echo " $sopt"
end
cat << EOF1
Available tests are in configuration/scripts/tests and include:
EOF1
set soptions1 = `ls -1 configuration/scripts/tests | grep test_ | grep script | sed 's/test_//g' | sed 's/.script//g' `
set soptions = `echo $soptions1 | fmt -1 | sort `
foreach sopt ($soptions)
echo " $sopt"
end
cat << EOF1
Available sets of predefined suites are in configurations/scripts/tests and include:
EOF1
set soptions1 = `ls -1 configuration/scripts/tests | grep "\.ts" | sed 's/\.ts//g' `
set soptions = `echo $soptions1 | fmt -1 | sort `
foreach sopt ($soptions)
echo " $sopt"
end
endif
exit -1
endif
#------------------------------------------------------------
# Read in command line arguments
echo " "
echo "${0}:"
set argv = ( $initargv[*] )
# check for --version
while (1)
if ($#argv < 1) break;
if ("$argv[1]" =~ "--version" ) then
echo "${0}: This is ${ICE_VERSION}"
exit -1
endif
shift argv
end
set argv = ( $initargv[*] )
# check for --setvers
while (1)
if ($#argv < 1) break;
if ("$argv[1]" =~ "--setvers" ) then
shift argv
if ( $#argv < 1 ) then
echo "${0}: ERROR in --setvers argument"
exit -1
endif
set versno = $argv[1]
${ICE_SCRIPTS}/set_version_number.csh $versno
if ($status != 0) then
echo "${0} ERROR in set_version_numbers.csh"
exit -1
endif
echo "Setting CICE version to ${versno} and exiting"
exit -1
endif
shift argv
end
set argv = ( $initargv[*] )
# read in all options
while (1)
if ( $#argv < 1 ) break;
set option = $argv[1];
# arguments without settings
if ("$option" == "--report") then
set report = 1
shift argv
else if ("$option" == "--coverage") then
set coverage = 1
set coverageflag = true
set suitereuse = false
shift argv
else if ("$option" == "--setup-only") then
set suitebuild = false
set suitereuse = true
set suiterun = false
set suitesubmit = false
shift argv
else if ("$option" == "--setup-build") then
set suitebuild = true
set suitereuse = true
set suiterun = false
set suitesubmit = false
shift argv
else if ("$option" == "--setup-build-run") then
set suitebuild = true
set suitereuse = true
set suiterun = true
set suitesubmit = false
shift argv
else if ("$option" == "--setup-build-submit") then
set suitebuild = true
set suitereuse = true
set suiterun = false
set suitesubmit = true
shift argv
# arguments with settings
else
shift argv
if ( $#argv < 1 ) then
echo "${0}: ERROR in $option, unsupported or missing an argument"
exit -1
endif
if ("$argv[1]" =~ "$dash*" ) then
echo "${0}: ERROR in $option, possibly missing an argument"
exit -1
endif
if ("$option" == "--case" || "$option" == "-c") then
set case = $argv[1]
set docase = 1
else if ("$option" =~ --mach* || "$option" == "-m") then
set machine = $argv[1]
else if ("$option" =~ --env* || "$option" == "-e") then
set envnames = $argv[1]
else if ("$option" == "--test") then
set test = $argv[1]
set dotest = 1
else if ("$option" == "--tdir") then
set tdir = $argv[1]
else if ("$option" == "--grid" || "$option" == "-g") then
set grid = $argv[1]
else if ("$option" == "--queue") then
set queue = $argv[1]
else if ("$option" == "--pes" || "$option" == "-p") then
set pesx = $argv[1]
else if ("$option" == "--acct") then
set acct = $argv[1]
else if ("$option" =~ --set* || "$option" == "-s") then
set sets = $argv[1]
else if ("$option" == "--bdir") then
set bdir = $argv[1]
else if ("$option" == "--bcmp") then
set baseCom = $argv[1]
else if ("$option" == "--bgen") then
set baseGen = $argv[1]
else if ("$option" == "--diff") then
set bfbcomp = $argv[1]
else if ("$option" == "--suite") then
set testsuite = $argv[1]
set dosuite = 1
else if ("$option" == "--testid") then
set testid = $argv[1]
else
echo "${0}: ERROR unknown option $option, use -h for help"
exit -1
endif
shift argv
endif
end
if (${machine} == ${spval}) then
echo "${0}: ERROR in arguments, --mach required"
exit -1
endif
@ dosum = ${docase} + ${dotest} + ${dosuite}
if (${dosum} == 0) then
echo "${0}: ERROR in arguments, --case, --test, or --suite required"
exit -1
endif
if (${dosum} > 1) then
echo "${0}: ERROR in arguments, cannot use more than one of --case, --test, and --suite"
exit -1
endif
if ($coverage == 1 && $report == 1) then
echo "${0}: ERROR in arguments, not recommmended to set both --coverage and --report"
exit -1
endif
if ($coverage == 1 && "$envnames" !~ "gnu*") then
echo "${0}: ERROR in arguments, must use --env gnu* with --coverage"
exit -1
endif
if ($coverage == 1 && `where curl` == "" && `where wget` == "") then
echo "${0}: ERROR 'curl' or 'wget' is required for --coverage"
exit -1
endif
if (${dosuite} == 0) then
if ($report == 1) then
echo "${0}: ERROR in arguments, must use --suite with --report"
exit -1
endif
if ($coverage == 1) then
echo "${0}: ERROR in arguments, must use --suite with --coverage"
exit -1
endif
if ("$envnames" =~ "*,*") then
echo "${0}: ERROR in arguments, cannot set multiple envnames without --suite"
exit -1
else
set envname = ${envnames}
set machcomp = ${machine}_${envname}
endif
else
if ($coverage == 1) then
if ("$envnames" =~ "*,*") then
echo "${0}: ERROR in arguments, cannot set multiple envnamess with --coverage"
exit -1
else
set envname = ${envnames}
set machcomp = ${machine}_${envname}
endif
endif
endif
if ((${dosuite} == 1 || ${dotest} == 1) && ${testid} == ${spval}) then
echo "${0}: ERROR in arguments. --testid must be passed if using --suite or --test"
exit -1
endif
#---------------------------------------------------------------------
# Setup tsfile and test suite support stuff
set tsdir = "."
set tsfile = "caselist.${sdate}-${stime}"
if ( ${dosuite} == 1 ) then
set tsdir = "testsuite.${testid}"
set tsfile = "testsuite.${testid}.${sdate}-${stime}.list"
endif
if ( ${tdir} != ${spval} ) then
set tsdir = ${tdir}
endif
if (-e ${tsfile}) then
echo "${0}: ERROR in tsfile, this should never happen"
exit -1
endif
set remote = `git remote -v | grep -i origin | grep -i push | sed "s|.*\(https.*\)\s.*|\1|g"`
set branch = `git status | grep -i "on branch" | sed 's|^.*ranch\s*\(\S*\)$|\1|g'`
set hash = `git log | grep -i commit | head -1 | cut -d " " -f 2-`
set hashuser = `git log | grep -i author | head -1 | cut -d : -f 2-`
set hashdate = `git log | grep -i date | head -1 | cut -d : -f 2-`
set cdate = `date -u "+%Y-%m-%d"`
set ctime = `date -u "+%H:%M:%S"`
set vers = ${ICE_VERSION}
set shhash = `echo ${hash} | cut -c 1-10`
if ( ${dosuite} == 0 ) then
set teststring = "${test} ${grid} ${pesx} ${sets}"
if ( $bfbcomp != ${spval} ) then
if ( ${sets} == "" ) then
set teststring = "${teststring} none ${bfbcomp}"
else
set teststring = "${teststring} ${bfbcomp}"
endif
endif
echo ${teststring} >! ${tsfile}
set sets = ""
else
set tarrays = `echo ${testsuite} | sed 's/,/ /g' | fmt -1 | sort -u`
set testsuitecnt = 0
foreach tarray ( ${tarrays} )
@ testsuitecnt = ${testsuitecnt} + 1
if (-e ${tarray}) then
cat ${tarray} >> $tsfile
else if (-e ${tarray}.ts) then
cat ${tarray}.ts >> $tsfile
else if (-e ${ICE_SCRIPTS}/tests/${tarray}.ts) then
cat ${ICE_SCRIPTS}/tests/${tarray}.ts >> $tsfile
else
echo "${0}: ERROR, cannot find testsuite file ${tarray}, also checked ${ICE_SCRIPTS}/tests/${tarray}.ts"
exit -1
endif
end
if (-e ${tsdir}) then
echo "${0}: ERROR, ${tsdir} already exists"
exit -1
endif
mkdir -p ${tsdir}
if ($status != 0) then
echo "${0}: ERROR, mkdir ${tsdir} aborted"
exit -1
endif
cp -f ${ICE_SCRIPTS}/tests/report_results.csh ${tsdir}
cp -f ${ICE_SCRIPTS}/tests/poll_queue.csh ${tsdir}
cat >! ${tsdir}/suite.submit << EOF0
#!/bin/csh -f
set nonomatch && rm -f ciceexe.* && unset nonomatch
set dobuild = true
set doreuse = true
set dorun = false
set dosubmit = true
if (\$?SUITE_BUILD) then
set dobuild = "\${SUITE_BUILD}"
endif
if (\$?SUITE_REUSEBUILD) then
set doreuse = "\${SUITE_REUSEBUILD}"
endif
if (\$?SUITE_RUN) then
set dorun = "\${SUITE_RUN}"
endif
if (\$?SUITE_SUBMIT) then
set dosubmit = "\${SUITE_SUBMIT}"
endif
echo \${0}: dobuild = \${dobuild}
echo \${0}: doreuse = \${doreuse}
echo \${0}: dorun = \${dorun}
echo \${0}: dosubmit = \${dosubmit}
if (\${dorun} == true && \${dosubmit} == true) then
echo \${0}: ERROR dorun and dosubmit should not both be true
exit -1
endif
EOF0
cat >! ${tsdir}/results.csh << EOF0
#!/bin/csh -f
rm -f results.log
echo "#------- " >> results.log
echo "#repo = ${remote}" >> results.log
echo "#bran = ${branch}" >> results.log
echo "#hash = ${hash}" >> results.log
echo "#hshs = ${shhash}" >> results.log
echo "#hshu = ${hashuser}" >> results.log
echo "#hshd = ${hashdate}" >> results.log
echo "#suit = ${testsuite}" >> results.log
echo "#date = ${cdate}" >> results.log
echo "#time = ${ctime}" >> results.log
echo "#mach = ${machine}" >> results.log
echo "#user = ${user}" >> results.log
echo "#vers = ${vers}" >> results.log
echo "#------- " >> results.log
EOF0
cat >! ${tsdir}/report_codecov.csh << EOF0
#!/bin/csh -f
source ${ICE_SCRIPTS}/machines/env.${machcomp}
set rn0 = "${sdate}-${stime}:${shhash}:${testsuitecnt}:${testsuite}"
set rn1 = \`echo \${rn0} | sed -e 's/ //g'\`
set report_name = \`echo \${rn1} | sed -e 's/_suite//g'\`
#for codecov
set use_curl = 1
# define CODECOV_TOKEN env variable
if !(\$?CODECOV_TOKEN) then
if (-e ~/.codecov_cice_token) then
source ~/.codecov_cice_token
endif
if !(\$?CODECOV_TOKEN) then
echo "\${0}: ERROR, CODECOV_TOKEN env variable not defined"
exit 2
endif
endif
#for lcov
set lcovalist = ""
EOF0
chmod +x ${tsdir}/suite.submit
chmod +x ${tsdir}/results.csh
chmod +x ${tsdir}/report_codecov.csh
cp -p -f ${tsdir}/report_codecov.csh ${tsdir}/report_lcov.csh
endif
#-------------------------------------------------------------------
# Loop over cases/tests
set nenvnames = "`echo $envnames | sed -e 's/,/ /g'`"
# check that machines and envnames are valid before starting big loop
set doabort = false
foreach envname ( $nenvnames )
set machcomp = ${machine}_${envname}
foreach file (env.${machcomp} Macros.${machcomp})
if !(-e ${ICE_SCRIPTS}/machines/$file) then
echo "${0}: ERROR, ${ICE_SCRIPTS}/machines/$file not found"
set doabort = true
endif
end
end
if (${doabort} == true) then
exit -1
endif
# Create a new sets_base variable to store sets passed to cice.setup
set sets_base = "${sets}"
set bfbcomp_base = "$bfbcomp"
foreach envname ( $nenvnames )
set machcomp = ${machine}_${envname}
foreach line ( "`cat $tsfile`" )
# Check if line is a comment line
if ( $line:q =~ '#'* || $line:q =~ '$'* || $line:q =~ '!'* ) then
echo "skipping line: $line"
continue
# Check if line is a sleep line, can only happen with suites
else if ( $line:q =~ 'sleep'*) then
cat >> ${tsdir}/suite.submit << EOF
echo "-------test--------------"
echo "$line:q"
$line:q
EOF
echo "adding sleep line: $line"
echo ""
echo "---"
echo ""
continue
endif
# unset env variables that might not exist in env machine file
# to avoid any carry over during multi envname suites
unsetenv ICE_MACHINE_MAXTHREADS
unsetenv ICE_MACHINE_MAXPES
unsetenv ICE_MACHINE_QUIETMODE
unsetenv ICE_MACHINE_CPPDEFS
unsetenv ICE_MACHINE_QSTAT
unsetenv ICE_MACHINE_MACHINFO
unsetenv ICE_MACHINE_ENVINFO
source ${ICE_SCRIPTS}/machines/env.${machcomp} -nomodules || exit 2
# Obtain the test name, sets, grid, and PE information from .ts file
set test = `echo $line | cut -d' ' -f1`
set grid = `echo $line | cut -d' ' -f2`
set pesx = `echo $line | cut -d' ' -f3`
set sets_tmp = `echo $line | cut -d' ' -f4`
set bfbcomp_tmp = `echo $line | cut -d' ' -f5`
# Append sets from .ts file to the $sets variable
set sets = "$sets_base,$sets_tmp"
# Create a new bfbcomp_base variable to store bfbcomp passed to cice.setup
# Use bfbcomp_base or bfbcomp_tmp
if ( $bfbcomp_tmp == "" ) then
set bfbcomp = "$bfbcomp_base"
else
set bfbcomp = "$bfbcomp_tmp"
endif
set fbfbcomp = ${spval}
if ($bfbcomp != ${spval}) then
set fbfbcomp = ${machcomp}_${bfbcomp}
endif
#------------------------------------------------------------
# Parse pesx with strict checking, limit pes for machine
set chck = `echo ${pesx} | sed 's/^[0-9][0-9]*x[0-9][0-9]*x[0-9][0-9]*x[0-9][0-9]*x[0-9][0-9]*$/OK/'`
if (${chck} == OK) then
set task = `echo ${pesx} | cut -d x -f 1`
set thrd = `echo ${pesx} | cut -d x -f 2`
set blckx = `echo ${pesx} | cut -d x -f 3`
set blcky = `echo ${pesx} | cut -d x -f 4`
set mblck = `echo ${pesx} | cut -d x -f 5`
if (${task} == 0 || ${thrd} == 0 || ${blckx} == 0 || ${blcky} == 0 || ${mblck} == 0) then
echo "${0}: ERROR in -p argument, cannot have zeros"
exit -1
endif
else
set chck = `echo ${pesx} | sed 's/^[0-9][0-9]*x[0-9][0-9]*x[0-9][0-9]*x[0-9][0-9]*$/OK/'`
if (${chck} == OK) then
set task = `echo ${pesx} | cut -d x -f 1`
set thrd = `echo ${pesx} | cut -d x -f 2`
set blckx = `echo ${pesx} | cut -d x -f 3`
set blcky = `echo ${pesx} | cut -d x -f 4`
set mblck = 0
if (${task} == 0 || ${thrd} == 0 || ${blckx} == 0 || ${blcky} == 0) then
echo "${0}: ERROR in -p argument, cannot have zeros"
exit -1
endif
else
set chck = `echo ${pesx} | sed 's/^[0-9][0-9]*x[0-9][0-9]*$/OK/'`
if (${chck} == OK) then
set task = `echo ${pesx} | cut -d x -f 1`
set thrd = `echo ${pesx} | cut -d x -f 2`
set blckx = 0
set blcky = 0
set mblck = 0
if (${task} == 0 || ${thrd} == 0) then
echo "${0}: ERROR in -p argument, cannot have zeros"
exit -1
endif
else
set chck = `echo ${pesx} | sed 's/^[0-9][0-9]*$/OK/'`
if (${chck} == OK) then
set task = `echo ${pesx} | cut -d x -f 1`
set thrd = 1
set blckx = 0
set blcky = 0
set mblck = 0
if (${task} == 0) then
echo "${0}: ERROR in -p argument, cannot have zeros"
exit -1
endif
else
echo "${0}: ERROR in -p argument, ${pesx}, must be [m], [m]x[n], [m]x[n]x[bx]x[by], or [m]x[n]x[bx]x[by]x[mb] "
exit -1
endif
endif
endif
endif
@ blkreq = ${task} * ${mblck}
# check max threads, reduce threads, increase tasks
if ($?ICE_MACHINE_MAXTHREADS) then
if (${thrd} > ${ICE_MACHINE_MAXTHREADS}) then
@ pesreq = ${task} * ${thrd}
@ task = ${pesreq} / ${ICE_MACHINE_MAXTHREADS}
@ thrd = ${ICE_MACHINE_MAXTHREADS}
@ peschk = ${task} * ${thrd}
if (${pesreq} > ${peschk}) then
@ task = ${task} + 1
endif
# echo "tcx1 reset to $task $thrd $mblck"
endif
endif
# check max pes, reduce tasks
if ($?ICE_MACHINE_MAXPES) then
@ pesreq = ${task} * ${thrd}
if (${pesreq} > ${ICE_MACHINE_MAXPES}) then
@ task = ${ICE_MACHINE_MAXPES} / ${thrd}
# echo "tcx2 reset to $task $thrd $mblck"
endif
endif
# check max blocks and adjust as needed
if ($mblck > 0) then
@ mblck = ${blkreq} / ${task}
@ blkchk = ${task} * ${mblck}
if (${blkreq} > ${blkchk}) then
@ mblck = $mblck + 1
endif
# echo "tcx3 reset to $task $thrd $mblck"
endif
# update pesx based on use defined settings and machine limits to reflect actual value
set pesx = ${task}x${thrd}x${blckx}x${blcky}x${mblck}
if (${mblck} == 0) then
set pesx = ${task}x${thrd}x${blckx}x${blcky}
endif
if (${blckx} == 0 || ${blcky} == 0) then
set pesx = ${task}x${thrd}
endif
set testname_noid = ${spval}
# create case for test cases
if (${docase} == 0) then
set soptions = ""
# Create sorted array and remove duplicates and "none"
set setsarray = `echo ${sets} | sed 's/,/ /g' | fmt -1 | sort -u`
if ("${setsarray}" != "") then
foreach field (${setsarray})
if (${field} != "none") then
set soptions = ${soptions}"_"${field}
endif
end
endif
# soptions starts with _
set testname_noid = "${machcomp}_${test}_${grid}_${pesx}${soptions}"
set testname_base = "${machcomp}_${test}_${grid}_${pesx}${soptions}.${testid}"
set testname = "${tsdir}/${testname_base}"
set case = ${testname}
endif
if (-d ${case}) then
echo "${0}: ERROR, case ${case} already exists"
# exit -1
continue
endif
if (${case} =~ */*) then
set casename = $case:t
else
set casename = $case
endif
#------------------------------------------------------------
# Setup case directory, copy files to case directory
mkdir -p ${case}
echo "`date` ${0} $initargv[*]" >> ${case}/README.case
cd ${case}
set casedir = `pwd`
set casescr = "${casedir}/casescripts"
if !( -d ${casescr}) mkdir ${casescr}
# set default test output as failure
if (${docase} == 0) then
echo "#---" >! test_output
echo "FAIL ${testname_noid} build" >> test_output
echo "FAIL ${testname_noid} run" >> test_output
endif
# from basic script dir to case
foreach file (cice.build cice.settings Makefile ice_in makdep.c setup_run_dirs.csh timeseries.csh timeseries.py)
if !(-e ${ICE_SCRIPTS}/$file) then
echo "${0}: ERROR, ${ICE_SCRIPTS}/$file not found"
exit -1
endif
cp -f -p ${ICE_SCRIPTS}/$file ${casedir}/
end
# from machines dir to case
foreach file (env.${machcomp} Macros.${machcomp})
if !(-e ${ICE_SCRIPTS}/machines/$file) then
echo "${0}: ERROR, ${ICE_SCRIPTS}/machines/$file not found"
exit -1
endif
cp -f -p ${ICE_SCRIPTS}/machines/$file ${casedir}/
end
# from basic script dir to casescr
foreach file (parse_namelist.sh parse_settings.sh parse_namelist_from_env.sh cice_decomp.csh cice.run.setup.csh cice.test.setup.csh)
if !(-e ${ICE_SCRIPTS}/$file) then
echo "${0}: ERROR, ${ICE_SCRIPTS}/$file not found"
exit -1
endif
cp -f -p ${ICE_SCRIPTS}/$file ${casescr}/
end
# from tests dir to casescr
foreach file (cice.results.csh cice.codecov.csh cice.lcov.csh)
if !(-e ${ICE_SCRIPTS}/tests/$file) then
echo "${0}: ERROR, ${ICE_SCRIPTS}/$file not found"
exit -1
endif
cp -f -p ${ICE_SCRIPTS}/tests/$file ${casescr}/
end
cd ${casedir}
set quietmode = false
if ($?ICE_MACHINE_QUIETMODE) then
set quietmode = ${ICE_MACHINE_QUIETMODE}
endif
set cppdefs = ""
if ($?ICE_MACHINE_CPPDEFS) then
set cppdefs = ${ICE_MACHINE_CPPDEFS}
endif
if (${acct} == ${spval}) then
if (-e ~/.cice_proj) then
set acct = `head -1 ~/.cice_proj`
else
set acct = ${ICE_MACHINE_ACCT}
endif
endif
if (${queue} == ${spval}) then
if (-e ~/.cice_queue) then
set queue = `head -1 ~/.cice_queue`
else
set queue = ${ICE_MACHINE_QUEUE}
endif
endif
set rundir = ${ICE_MACHINE_WKDIR}/${casename}
#------------------------------------------------------------
# Compute a default blocksize
setenv ICE_DECOMP_GRID ${grid}
setenv ICE_DECOMP_NTASK ${task}
setenv ICE_DECOMP_NTHRD ${thrd}
setenv ICE_DECOMP_BLCKX ${blckx}
setenv ICE_DECOMP_BLCKY ${blcky}
setenv ICE_DECOMP_MXBLCKS ${mblck}
source ${casescr}/cice_decomp.csh
if ($status != 0) then
echo "${0}: ERROR, cice_decomp.csh aborted"
exit -1
endif
echo "ICE_SANDBOX = ${ICE_SANDBOX}"
echo "ICE_CASENAME = ${casename}"
echo "ICE_CASEDIR = ${casedir}"
echo "ICE_MACHINE = ${machine}"
echo "ICE_ENVNAME = ${envname}"
echo "ICE_RUNDIR = ${rundir}"
echo "ICE_PES = ${task}x${thrd}"
echo "ICE_GRID = ${grid} (${ICE_DECOMP_NXGLOB}x${ICE_DECOMP_NYGLOB}) blocksize=${ICE_DECOMP_BLCKX}x${ICE_DECOMP_BLCKY}x${ICE_DECOMP_MXBLCKS}"
echo "ICE_DECOMP = ${ICE_DECOMP_DECOMP} ${ICE_DECOMP_DSHAPE}"
#------------------------------------------------------------
# Copy in and update cice.settings and ice_in files
set fimods = ${casescr}/ice_in.mods
set fsmods = ${casescr}/cice.settings.mods
cp ice_in ${casescr}/ice_in.base
cp cice.settings ${casescr}/cice.settings.base
if (-e ${fimods}) rm ${fimods}
if (-e ${fsmods}) rm ${fsmods}
cat >! ${fimods} << EOF1
# cice.setup settings
nprocs = ${task}
nx_global = ${ICE_DECOMP_NXGLOB}
ny_global = ${ICE_DECOMP_NYGLOB}
block_size_x = ${ICE_DECOMP_BLCKX}
block_size_y = ${ICE_DECOMP_BLCKY}
max_blocks = ${ICE_DECOMP_MXBLCKS}
distribution_type = '${ICE_DECOMP_DECOMP}'
processor_shape = '${ICE_DECOMP_DSHAPE}'
version_name = '${ICE_VERSION}'
EOF1
# If this is a baseline-compare test, modify ICE_RUNDIR
if ($bdir != ${spval}) then
setenv basedir_tmp ${bdir}
else
setenv basedir_tmp ${ICE_MACHINE_BASELINE}
endif
if ("$baseGen" =~ "default") then
set d1 = `echo ${cdate} | cut -c 3- | sed 's/-//g'`
set t1 = `echo ${ctime} | sed 's/://g'`
set baseGen = cice.${shhash}.${d1}-${t1}
endif
if ("$baseCom" =~ "default") then
set baseCom = `ls -t $basedir_tmp | head -1`
endif
cat >! ${fsmods} << EOF1
# cice.setup settings
setenv ICE_SANDBOX ${ICE_SANDBOX}
setenv ICE_SCRIPTS ${ICE_SCRIPTS}
setenv ICE_CASENAME ${casename}
setenv ICE_CASEDIR ${casedir}
setenv ICE_MACHINE ${machine}
setenv ICE_ENVNAME ${envname}
setenv ICE_MACHCOMP ${machcomp}
setenv ICE_RUNDIR ${rundir}
setenv ICE_GRID ${grid}
setenv ICE_NTASKS ${task}
setenv ICE_NTHRDS ${thrd}
setenv ICE_BASELINE ${basedir_tmp}
setenv ICE_BASEGEN ${baseGen}
setenv ICE_BASECOM ${baseCom}
setenv ICE_SPVAL ${spval}
setenv ICE_CPPDEFS ${cppdefs}
setenv ICE_QUIETMODE ${quietmode}
setenv ICE_TEST ${test}
setenv ICE_TESTNAME ${testname_noid}
setenv ICE_TESTID ${testid}
setenv ICE_BFBCOMP ${fbfbcomp}
setenv ICE_ACCOUNT ${acct}
setenv ICE_QUEUE ${queue}
setenv ICE_COVERAGE ${coverageflag}
EOF1
if (${sets} != "") then
set setsx = `echo ${sets} | sed 's/,/ /g'`
set setsxorig = "$setsx"
set setsx = ""
foreach name ($setsxorig)
if (-e ${ICE_SCRIPTS}/options/set_files.${name}) then
echo "adding options files from set_files.${name}"
echo "`date` ${0} adding options files from set_files.${name}" >> ${casedir}/README.case
set setsnew = `cat ${ICE_SCRIPTS}/options/set_files.${name}`
foreach nset ($setsnew)
if ($nset !~ "#*") then
set setsx = "$setsx $nset"
endif
end
else
set setsx = "$setsx $name"
endif
end
else
set setsx = ""
endif
if (${docase} == 0) then
# from test options to casescr in case any test time changes are applied
cp -f -p ${ICE_SCRIPTS}/tests/comparebfb.csh ${casescr}
cp -f -p ${ICE_SCRIPTS}/tests/comparelog.csh ${casescr}
if (-e ${ICE_SCRIPTS}/tests/test_${test}.files) then
cp -f -p ${ICE_SCRIPTS}/tests/test_${test}.files ${casescr}
foreach file (`cat ${casescr}/test_${test}.files`)
if (-e ${ICE_SCRIPTS}/options/$file) then
cp -f -p ${ICE_SCRIPTS}/options/$file ${casescr}
else
echo "${0}: ERROR, could not find $file from test_${test}.files"
exit -1
endif
end
endif
endif
foreach name (${grid} $setsx)
set found = 0
if (-e ${ICE_SCRIPTS}/options/set_nml.${name}) then
cat >> ${fimods} << EOF2
# set_nml.${name}
EOF2
cat ${ICE_SCRIPTS}/options/set_nml.${name} >> ${fimods}
cat >> ${fimods} << EOF2
EOF2
echo "adding namelist mods set_nml.${name}"
echo "`date` ${0} adding namelist modes set_nml.${name}" >> ${casedir}/README.case
set found = 1
endif
if (-e ${ICE_SCRIPTS}/options/set_env.${name}) then
cat >> ${fsmods} << EOF2
# set_env.${name}
EOF2
cat ${ICE_SCRIPTS}/options/set_env.${name} >> ${fsmods}
cat >> ${fsmods} << EOF2