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50 Open 37 Closed
50 Open 37 Closed
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Issues list

I would like to add x numer of N between concatenated sequences with collapse enhancement We don't do that here... yet
#98 opened Jul 5, 2023 by ericgonzalezs
2
How do you bite rowwise? discussion Development direction idea to quarrel over
#97 opened Mar 31, 2023 by m3hdad
2
Add better check for file existence enhancement We don't do that here... yet
#91 opened Dec 15, 2021 by ErdaradunGaztea
R session crashes when searching for "^" or "$" motif bug Something isn't working
#90 opened Sep 21, 2021 by DominikRafacz
Interpret [A, C, T, G, N] as dna_ext bug Something isn't working refactor Because we have too much free time
#89 opened Jul 14, 2021 by ErdaradunGaztea
add more test for options with usage of withr
#87 opened Apr 1, 2021 by DominikRafacz
AMP case study
#86 opened Mar 8, 2021 by michbur
Refactor specific types of integers (like LenSq) on C++ side C++ adventures We thought we know how this language works... but sometimes...
#85 opened Mar 5, 2021 by DominikRafacz
Add more convenience parameters to sqapply (like simplify) enhancement We don't do that here... yet
#84 opened Feb 28, 2021 by DominikRafacz
Formalize sqibble discussion Development direction idea to quarrel over enhancement We don't do that here... yet refactor Because we have too much free time
#83 opened Feb 28, 2021 by DominikRafacz
@michbur
2
Implement has_X as an analogue to remove_X enhancement We don't do that here... yet
#82 opened Feb 27, 2021 by ErdaradunGaztea
Optimize find_motifs() using some specialized string-searching algorythm performance Maybe we can do it harder, better, faster, stronger?
#81 opened Feb 8, 2021 by ErdaradunGaztea
Cannot use dplyr::group_by with sq objects bug Something isn't working
#80 opened Feb 5, 2021 by ErdaradunGaztea
Implement replace_motifs() enhancement We don't do that here... yet
#79 opened Feb 3, 2021 by ErdaradunGaztea
Include bioseq in comparisons documentation Improvements or additions to documentation
#78 opened Feb 3, 2021 by ErdaradunGaztea
Create changelog documentation Improvements or additions to documentation
#77 opened Jan 25, 2021 by ErdaradunGaztea
Prettify tidysq options printing refactor Because we have too much free time
#76 opened Jan 23, 2021 by ErdaradunGaztea
Implement exporting sq objects (or sqibbles) to LaTeX tables enhancement We don't do that here... yet
#75 opened Jan 23, 2021 by ErdaradunGaztea
Hide LetterTree, LetterNode and Motif classes from the public C++ adventures We thought we know how this language works... but sometimes... enhancement We don't do that here... yet
#74 opened Dec 30, 2020 by ErdaradunGaztea
Implement duplicated.sq() enhancement We don't do that here... yet
#73 opened Dec 20, 2020 by ErdaradunGaztea
Find out if adding all possible LetterValues to value_to_letter map in alphabet results in better performance than using conditional performance Maybe we can do it harder, better, faster, stronger?
#71 opened Dec 17, 2020 by DominikRafacz
Rethink the idea of unpacking NA values in string vectors discussion Development direction idea to quarrel over
#69 opened Dec 17, 2020 by DominikRafacz
Add comparison and casting betwenn STD_IT and RCPP_IT objects enhancement We don't do that here... yet
#67 opened Dec 17, 2020 by DominikRafacz
Use template functions for packing and unpacking instead of explicitly specyfying bit shifts C++ adventures We thought we know how this language works... but sometimes... refactor Because we have too much free time
#66 opened Dec 17, 2020 by DominikRafacz
Handle case of codon tables with nontranslatable codons enhancement We don't do that here... yet
#62 opened Dec 11, 2020 by DominikRafacz
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