Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
BenjaminIsaac0111
SpatialTranscriptFormer
Repository navigation
Code
Issues
Pull requests
Actions
Projects
Security and quality
Insights
More
items
Actions: BenjaminIsaac0111/SpatialTranscriptFormer
Actions
All workflows
Workflows
CI
CI
Show more workflows...
Management
Caches
All workflows
All workflows
Actions
Loading...
Loading
Sorry, something went wrong.
Uh oh!
There was an error while loading.
Please reload this page
.
will be ignored since log searching is not yet available
Showing runs from all workflows
will be ignored since log searching is not yet available
85 workflow runs
85 workflow runs
Workflow
Filter by Workflow
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching workflows.
Event
Filter by Event
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching events.
Status
Filter by Status
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching statuses.
Branch
Filter by Branch
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching branches.
Actor
Filter by Actor
Sorry, something went wrong.
Filter
Loading
Sorry, something went wrong.
No matching users.
Merge branch 'main' into feat/primary-pathway-loss
CI
#60:
Commit
d95b3c1
pushed by
BenjaminIsaac0111
1m 56s
feat/primary-pathway-loss
feat/primary-pathway-loss
1m 56s
View #9
View workflow file
- fixed the CI collection errors and implemented a local pre-commit h…
CI
#59:
Commit
186b04a
pushed by
BenjaminIsaac0111
2m 10s
feat/primary-pathway-loss
feat/primary-pathway-loss
2m 10s
View workflow file
refactor: remove redundant gene vocabulary loading and alignment
CI
#58:
Commit
9f28809
pushed by
BenjaminIsaac0111
1m 23s
feat/primary-pathway-loss
feat/primary-pathway-loss
1m 23s
View workflow file
- Skipping the pathway data intergrety tests. Just skipping as this i…
CI
#57:
Commit
bf8e51c
pushed by
BenjaminIsaac0111
2m 2s
feat/primary-pathway-loss
feat/primary-pathway-loss
2m 2s
View workflow file
chore: update .gitattributes for artefact data handling
CI
#56:
Commit
b3db747
pushed by
BenjaminIsaac0111
2m 0s
feat/primary-pathway-loss
feat/primary-pathway-loss
2m 0s
View workflow file
- Cleaned up and adapted tests to new model pipeline. God this took a…
CI
#55:
Commit
92e9076
pushed by
BenjaminIsaac0111
1m 7s
feat/primary-pathway-loss
feat/primary-pathway-loss
1m 7s
View workflow file
README.md:
CI
#54:
Commit
86f11a5
pushed by
BenjaminIsaac0111
2m 11s
feat/primary-pathway-loss
feat/primary-pathway-loss
2m 11s
View workflow file
README.md: (#8)
CI
#53:
Commit
5581172
pushed by
BenjaminIsaac0111
2m 12s
main
main
2m 12s
View workflow file
Literature Review, March 2026:
CI
#52:
Pull request
#8
opened by
BenjaminIsaac0111
2m 10s
research/literature-review-march-2026
research/literature-review-march-2026
2m 10s
View #8
View workflow file
README.md:
CI
#51:
Commit
86f11a5
pushed by
BenjaminIsaac0111
2m 4s
research/literature-review-march-2026
research/literature-review-march-2026
2m 4s
View #8
View workflow file
Implementing svg (#7)
CI
#50:
Commit
472bd5f
pushed by
BenjaminIsaac0111
2m 9s
main
main
2m 9s
View workflow file
Implementing svg
CI
#49:
Pull request
#7
opened by
BenjaminIsaac0111
2m 23s
Implementing-SVG
Implementing-SVG
2m 23s
View #7
View workflow file
- maybe now?
CI
#48:
Commit
a689375
pushed by
BenjaminIsaac0111
2m 9s
Implementing-SVG
Implementing-SVG
2m 9s
View #7
View workflow file
- forgot this...
CI
#47:
Commit
ebbefa7
pushed by
BenjaminIsaac0111
1m 11s
Implementing-SVG
Implementing-SVG
1m 11s
View workflow file
- added .gitattributes
CI
#46:
Commit
554fd91
pushed by
BenjaminIsaac0111
1m 10s
Implementing-SVG
Implementing-SVG
1m 10s
View workflow file
- Applied black formatting.
CI
#45:
Commit
4842022
pushed by
BenjaminIsaac0111
1m 5s
Implementing-SVG
Implementing-SVG
1m 5s
View workflow file
Refactor: Centralize data management and reorganize test suite
CI
#44:
Commit
ca6f5b1
pushed by
BenjaminIsaac0111
1m 17s
Implementing-SVG
Implementing-SVG
1m 17s
View workflow file
feat: add SVG-aware gene selection and spatial coherence validation
CI
#43:
Commit
f34e8c3
pushed by
BenjaminIsaac0111
1m 5s
Implementing-SVG
Implementing-SVG
1m 5s
View workflow file
- Added some docs on possible ideas and recommendations to explore to…
CI
#42:
Commit
7d75160
pushed by
BenjaminIsaac0111
2m 22s
main
main
2m 22s
View workflow file
New Feature - API Framework (#6)
CI
#41:
Commit
d6cd678
pushed by
BenjaminIsaac0111
2m 13s
main
main
2m 13s
View workflow file
New Feature - API Framework
CI
#40:
Pull request
#6
opened by
BenjaminIsaac0111
2m 6s
Feature-API-Design
Feature-API-Design
2m 6s
View #6
View workflow file
- reformatted the 6 files identified ifor CI/CD check (black formatte…
CI
#39:
Commit
bf48327
pushed by
BenjaminIsaac0111
2m 20s
Feature-API-Design
Feature-API-Design
2m 20s
View #6
View workflow file
- Minor update to the docs for clarification on the API and Dataset R…
CI
#38:
Commit
c59bd58
pushed by
BenjaminIsaac0111
1m 16s
Feature-API-Design
Feature-API-Design
1m 16s
View workflow file
docs: clarify licensing and add third-party attributions
CI
#37:
Commit
5cb9674
pushed by
BenjaminIsaac0111
1m 7s
Feature-API-Design
Feature-API-Design
1m 7s
View workflow file
feat: restructure project into a robust framework with Trainer API an…
CI
#36:
Commit
e84a9de
pushed by
BenjaminIsaac0111
2m 10s
Feature-API-Design
Feature-API-Design
2m 10s
View workflow file
Previous
1
2
3
4
Next
You can’t perform that action at this time.