Removed erroneous cell from psa_short/long.ipynb

Author: sseyler

psa_full.ipynb

@@ -608,168 +608,6 @@
     "frechet_vectorform = squareform(frechet_distances)"
    ]
   },
-  {
-   "cell_type": "markdown",
-   "metadata": {},
-   "source": [
-    "Checking the first few elements of the Hausdorff distance vector shows agreement with the annotated heat map plotted above."
-   ]
-  },
-  {
-   "cell_type": "code",
-   "execution_count": 24,
-   "metadata": {
-    "collapsed": false
-   },
-   "outputs": [
-    {
-     "data": {
-      "text/plain": [
-       "array([ 1.40127065,  1.34511455,  3.00429923,  3.06596937,  3.14492933,\n",
-       "        2.80201939,  3.04536043,  3.22165277,  2.19575924,  2.27236587,\n",
-       "        2.27082368,  2.02730172,  2.08329844,  2.08022913,  2.58995214,\n",
-       "        2.59638442,  2.34876629,  3.71952424,  3.74115518,  3.78914628,\n",
-       "        2.37139989,  2.81818782,  3.04574017,  1.94857992,  2.0051007 ,\n",
-       "        2.05988242,  3.02660817,  3.38155509,  3.43996765,  3.2810386 ,\n",
-       "        3.26434508,  3.46522397,  1.96966978,  1.94027152,  2.008916  ,\n",
-       "        2.0064126 ,  1.35808846,  2.98153796,  2.95480983,  3.13485413,\n",
-       "        3.09403909,  3.27226183,  3.4733851 ,  2.11442133,  2.14611114,\n",
-       "        2.10442086,  1.84253559,  1.88382322,  1.86563951,  2.61849815,\n",
-       "        2.45028208,  2.17578076,  3.93545174,  3.92145435,  3.95649563,\n",
-       "        2.3125888 ,  2.79420882,  3.10855578,  1.74912378,  1.79320325,\n",
-       "        1.84774906,  2.90336039,  3.35766604,  3.50329044,  3.18451523,\n",
-       "        3.14721242,  3.28030068,  1.76152192,  1.79955706,  1.84979361,\n",
-       "        1.84637401,  2.98163648,  2.99096965,  3.09586742,  2.92291731,\n",
-       "        3.11625163,  3.30535811,  2.21718569,  2.24302459,  2.19927273,\n",
-       "        2.05442   ,  2.09242232,  2.07395889,  2.3746498 ,  2.64524827,\n",
-       "        2.24240806,  3.77020392,  3.75020443,  3.75312127,  2.33130567,\n",
-       "        2.71440408,  2.97398299,  1.88116442,  1.93301534,  1.95665423,\n",
-       "        2.98653043,  3.3167242 ,  3.39791319,  3.2032769 ,  3.2032769 ,\n",
-       "        3.43564694,  1.92629469,  1.91589487,  1.96245566,  1.95973298,\n",
-       "        2.2039359 ,  2.22494574,  4.15435697,  4.37482411,  4.43147482,\n",
-       "        2.74090998,  2.64812313,  2.60832724,  2.46272558,  2.45857825,\n",
-       "        2.44846884,  2.75004148,  2.84732544,  2.94242626,  3.70551213,\n",
-       "        3.63725383,  3.65315261,  2.7280801 ,  2.87093016,  3.06102735,\n",
-       "        2.57135568,  2.59070934,  2.59243805,  2.80819882,  3.09065753,\n",
-       "        3.22541113,  3.46472169,  3.37537299,  3.46472169,  2.59142416,\n",
-       "        2.66195679,  2.60160811,  2.60184676,  2.27098619,  4.24202796,\n",
-       "        4.40962806,  4.43398802,  2.74360415,  2.72537372,  2.61856558,\n",
-       "        2.42081583,  2.42669055,  2.41427031,  2.71427421,  2.78654248,\n",
-       "        2.8107458 ,  3.69876655,  3.6552492 ,  3.69020177,  2.67443311,\n",
-       "        2.82508128,  3.0161109 ,  2.49363466,  2.53975716,  2.53987956,\n",
-       "        2.75511463,  3.04036962,  3.20089534,  3.47599467,  3.40847737,\n",
-       "        3.45971508,  2.4935451 ,  2.56264458,  2.51539291,  2.51590491,\n",
-       "        4.20981647,  4.39543505,  4.43407113,  2.79913772,  2.81334359,\n",
-       "        2.65746927,  2.4778299 ,  2.50275658,  2.46412406,  2.7587914 ,\n",
-       "        2.90145125,  3.00160531,  3.62867244,  3.58759759,  3.63915439,\n",
-       "        2.75178857,  2.87186653,  3.02444434,  2.57327108,  2.61674011,\n",
-       "        2.62819427,  2.82778552,  3.04304844,  3.09994335,  3.58510999,\n",
-       "        3.45994227,  3.53103774,  2.60277966,  2.66858756,  2.64411527,\n",
-       "        2.645399  ,  1.24168325,  1.05857294,  3.13677978,  3.19623647,\n",
-       "        3.48150417,  3.81686787,  3.78815544,  3.80376647,  3.60395383,\n",
-       "        4.07841201,  3.34357957,  4.49225486,  4.48855368,  4.51032977,\n",
-       "        3.82263249,  4.16187376,  4.24372368,  3.54306931,  3.56927042,\n",
-       "        3.59451149,  4.23848119,  4.3164177 ,  4.41392067,  4.27842977,\n",
-       "        4.27842977,  4.35139058,  3.57675596,  3.57943805,  3.62278247,\n",
-       "        3.62097539,  0.94643589,  3.37563594,  3.36389984,  3.68508294,\n",
-       "        4.03453458,  4.00024841,  4.02516543,  3.8207793 ,  4.23318034,\n",
-       "        3.68449344,  4.65742322,  4.65621986,  4.6713436 ,  4.07205809,\n",
-       "        4.39180476,  4.40045245,  3.75854325,  3.79781475,  3.82528415,\n",
-       "        4.40955899,  4.52464573,  4.59420718,  4.40573266,  4.43739279,\n",
-       "        4.61549347,  3.78431927,  3.78650155,  3.82942949,  3.82648049,\n",
-       "        3.54997337,  3.52078379,  3.81329709,  4.16764378,  4.11058497,\n",
-       "        4.16651309,  3.97724603,  4.32470781,  3.8158754 ,  4.54329138,\n",
-       "        4.54317562,  4.54775761,  4.18740751,  4.43124878,  4.4312251 ,\n",
-       "        3.91740536,  3.95379607,  3.98371811,  4.46456582,  4.5023029 ,\n",
-       "        4.50565326,  4.43123462,  4.43635528,  4.56375457,  3.93798774,\n",
-       "        3.93921227,  3.98768932,  3.98457385,  1.3335819 ,  1.29403336,\n",
-       "        1.91961439,  1.9068943 ,  1.91423519,  2.58253426,  2.71456978,\n",
-       "        2.35026645,  3.31196062,  3.22970455,  3.1867372 ,  2.0232114 ,\n",
-       "        2.2346775 ,  2.43703121,  1.83292405,  1.90229896,  1.90474005,\n",
-       "        2.41478863,  2.75391808,  2.87601339,  3.13875278,  2.99705737,\n",
-       "        3.13875278,  1.77775503,  1.80472164,  1.81596823,  1.81562613,\n",
-       "        1.31693804,  1.93083329,  1.93080485,  1.93889942,  2.49858415,\n",
-       "        2.5927947 ,  2.22471961,  3.55324209,  3.48576657,  3.50191039,\n",
-       "        2.15568089,  2.46496215,  2.73657319,  1.85516026,  1.89991959,\n",
-       "        1.90830899,  2.59936139,  3.00199116,  3.12463381,  3.21136729,\n",
-       "        3.100428  ,  3.21136729,  1.78108827,  1.81419694,  1.81504426,\n",
-       "        1.81297594,  1.63357513,  1.62038364,  1.62621779,  2.43925802,\n",
-       "        2.45128594,  2.28290547,  3.10842751,  3.07149462,  3.15531478,\n",
-       "        1.92934649,  2.10894059,  2.36449638,  1.60980115,  1.77944719,\n",
-       "        1.79444119,  2.23846489,  2.58185343,  2.73663197,  2.99372917,\n",
-       "        2.88659478,  2.99372917,  1.4687064 ,  1.49449216,  1.4948737 ,\n",
-       "        1.49365561,  0.59397116,  0.60078854,  1.99115587,  2.03899809,\n",
-       "        2.15119155,  2.93283505,  2.99259172,  3.11118533,  1.54115967,\n",
-       "        1.76120001,  2.0474848 ,  0.99506856,  1.32847467,  1.3963143 ,\n",
-       "        1.72089038,  2.15701479,  2.28922397,  2.82805088,  2.67613907,\n",
-       "        2.78429503,  0.82594393,  0.96238949,  1.01159453,  1.01025156,\n",
-       "        0.58758439,  1.98891034,  1.97720033,  2.12309347,  2.99941859,\n",
-       "        3.04028228,  3.14273933,  1.58128602,  1.8470815 ,  2.13434725,\n",
-       "        1.02218201,  1.34718348,  1.41954361,  1.74890771,  2.14348689,\n",
-       "        2.3078152 ,  2.8419625 ,  2.68885297,  2.80335168,  0.87301137,\n",
-       "        1.03481968,  1.0875517 ,  1.08449606,  1.95536568,  1.98001668,\n",
-       "        2.07291258,  2.95594628,  2.9796546 ,  3.05457293,  1.52591324,\n",
-       "        1.78327787,  2.04375608,  1.04525941,  1.35472683,  1.38289825,\n",
-       "        1.67103974,  2.10592917,  2.26858278,  2.81809846,  2.68986152,\n",
-       "        2.75891752,  0.85786452,  0.9747726 ,  1.02496363,  1.02421792,\n",
-       "        2.14017661,  2.07944693,  2.97827774,  3.01384272,  3.00064071,\n",
-       "        2.19064595,  2.28090128,  2.33459979,  2.06983276,  2.19511541,\n",
-       "        2.29952619,  2.28562165,  2.58390234,  2.61445197,  3.16048974,\n",
-       "        3.09168371,  3.14500007,  2.05243254,  1.9966701 ,  1.98161306,\n",
-       "        1.98301407,  2.10481169,  3.5789491 ,  3.6037039 ,  3.79314013,\n",
-       "        2.77222469,  2.96136765,  3.13037724,  2.03438073,  2.17111058,\n",
-       "        2.28083438,  2.81027645,  2.99827978,  3.2025517 ,  3.23692719,\n",
-       "        3.15268621,  3.17796475,  2.0633934 ,  2.17278906,  2.20136031,\n",
-       "        2.19589952,  3.90842988,  3.90842988,  3.93597249,  2.46066189,\n",
-       "        2.90155378,  3.20026371,  1.93429341,  2.0149798 ,  2.04382272,\n",
-       "        2.85287885,  3.28088595,  3.46922785,  2.98890092,  2.91166722,\n",
-       "        2.96990349,  2.02373982,  2.02763856,  2.06234553,  2.05912476,\n",
-       "        0.51022344,  1.19835934,  2.73868923,  1.90504436,  1.47594083,\n",
-       "        3.17161908,  3.29864693,  3.25157784,  2.39466289,  2.02730876,\n",
-       "        1.74024139,  3.42770116,  3.04476519,  2.93502716,  2.93372123,\n",
-       "        2.84625685,  2.76596117,  2.76821929,  0.84801763,  2.69593834,\n",
-       "        1.86184839,  1.43304281,  3.26210481,  3.41544773,  3.36037837,\n",
-       "        2.56908628,  2.15221743,  1.85760518,  3.37793315,  3.01596773,\n",
-       "        2.87438428,  2.97614211,  2.93415567,  2.8471856 ,  2.84999067,\n",
-       "        2.60390732,  1.85397863,  1.43035624,  3.35044472,  3.52580626,\n",
-       "        3.46626976,  2.67372565,  2.28191891,  1.98345672,  3.40770411,\n",
-       "        3.06986927,  2.93895322,  3.07741164,  3.05746814,  2.97140297,\n",
-       "        2.97536634,  0.98408377,  1.41008278,  1.35882398,  1.70576435,\n",
-       "        1.81827668,  1.81292057,  1.85464316,  2.04375936,  2.53498831,\n",
-       "        2.2121869 ,  2.36845587,  1.31794677,  1.31741333,  1.30223726,\n",
-       "        1.30507481,  0.6265704 ,  1.82205828,  2.08481054,  2.13238755,\n",
-       "        2.1383631 ,  1.76657595,  1.50745547,  2.830635  ,  2.39252809,\n",
-       "        2.39136982,  1.61642764,  1.55030948,  1.49385366,  1.49966451,\n",
-       "        2.16397782,  2.37866469,  2.41674009,  2.30692856,  1.9200981 ,\n",
-       "        1.58293209,  2.9202493 ,  2.46964934,  2.36540184,  1.95712026,\n",
-       "        1.88727191,  1.82425694,  1.82901367,  0.74717971,  0.96603555,\n",
-       "        1.70904242,  2.28619384,  2.47093783,  2.66652649,  2.54405568,\n",
-       "        2.66743389,  0.8370897 ,  0.89230122,  0.95736303,  0.95708795,\n",
-       "        0.51660176,  1.7456291 ,  2.33760194,  2.5434131 ,  2.64285531,\n",
-       "        2.54686279,  2.6801247 ,  1.17834807,  1.17153884,  1.22036372,\n",
-       "        1.21946799,  1.69438788,  2.28902711,  2.51113062,  2.58740001,\n",
-       "        2.50010016,  2.58740001,  1.20739691,  1.1745195 ,  1.19987082,\n",
-       "        1.19719775,  0.82636464,  1.08947466,  2.85484134,  2.63560754,\n",
-       "        2.5515131 ,  1.67390596,  1.69918195,  1.66656486,  1.67224549,\n",
-       "        0.54069003,  3.13483157,  2.78603108,  2.77740837,  2.18520916,\n",
-       "        2.20442967,  2.164321  ,  2.16809731,  3.20966092,  2.89646634,\n",
-       "        2.73379416,  2.36069831,  2.38023479,  2.34033898,  2.34404666,\n",
-       "        0.72519893,  1.2023348 ,  2.71331341,  2.69684948,  2.70856898,\n",
-       "        2.73578944,  0.71609317,  2.5562017 ,  2.57966458,  2.56875932,\n",
-       "        2.57486164,  2.69814174,  2.69557005,  2.68766767,  2.66762827,\n",
-       "        0.36921221,  0.51400241,  0.51227574,  0.37116149,  0.36973577,\n",
-       "        0.07966737])"
-      ]
-     },
-     "execution_count": 24,
-     "metadata": {},
-     "output_type": "execute_result"
-    }
-   ],
-   "source": [
-    "hausdorff_vectorform"
-   ]
-  },
   {
    "cell_type": "code",
    "execution_count": 25,