test.config

params {
    config_profile_name = 'Test profile'
    config_profile_description = 'Test dataset to check pipeline function'

    // Limit resources so that this can run on GitHub Actions
    max_cpus = 2
    max_memory = 6.GB
    max_time = 48.h

    // Input data for test data
    input = 'https://raw.githubusercontent.com/BarryDigby/CRT_workshop/master/docs/source/test_datasets/samples.csv'
    fasta = 'https://raw.githubusercontent.com/BarryDigby/CRT_workshop/master/docs/source/test_datasets/chrI.fa'
    gtf = 'https://raw.githubusercontent.com/BarryDigby/CRT_workshop/master/docs/source/test_datasets/chrI.gtf'    
    outdir = 'test_outdir/'
}

// overwrite the -B bind path we used for singularity
// Docker will fail trying to use it
process{
  containerOptions = null
}