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erpinResult.pir
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erpinResult.pir
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#
# This class represent erpin result.
#
- PerlClass PirObject::erpinResult
- InheritsFrom PirObject
- FieldsTable
# Field name Sing/Array/Hash Type Comments
#---------------------- --------------- --------------- -----------------------
structure single string Alignement structure
StructArray array string Structure split in elem
bracket single string Bracket structure
BracketLogArray array string Bracket structure split in elem
consensus single string Consensus structure
fileName single string Name of file used for research
structureLen single int4 Structure length
SequenceLen single int4 Sequence length
NumItem single string Item number
Label single string Label name
comment single string A comment
modTab array int4 number identification for module, can be a list of number
Alignments array <erpinAlignment> Contain all information about each alignment
OriSol single int4 Nb of original solution
OriFusSol single int4 Nb of original unique solution when model was fusioned.
time single string time for run erpin
maxBitLength array int4 Conserved maxBitLen (len of each elem...) little bit wrong for non search elem.
elemLength array int4 Conserved element length in order.
erpinMaskNums array int4 Elem searched by erpin
modelFile single string Model used in oredre to run erpin
gaptoend single string list of elements where gaps must be placed at the end
commentForMFa single string comment for MFannot
toComment single int4 if startline need to be in comment in Masterfile