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RELEASES.md

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Release 0.38.1 (2024-11-06)

  • Fix error in O3 feature

Release 0.38.0 (Yanked)

New features - Complex & Parallel

Generic Matrix - MatrixTrait

  • Implement MatrixTrait for Matrix (Scalar = f64)
  • Implement MatrixTrait for ComplexMatrix (Scalar = C64)
  • LinearAlgebra and solve depend on MatrixTrait

Other changes

  • Update puruspe dependency to 0.3.0, remove lambert_w dependency #79 (Thanks to @JSorngard)

  • Add hermite_polynomial and bessel_polynomial #80 (Thanks to @jgrage)

Release 0.37.9 (2024-07-31)

  • Fix inconsistent lambert w function name #65 (Thanks to @JSorngard)

Release 0.37.8 (2024-07-30)

  • Integrate with lambert_w crate (#63) (Thanks to @JSorngard)
    • Write flexible wrapper for lambert_w

      pub enum LambertWAccuracyMode {
          Simple,   // Faster, 24 bits of accuracy
          Precise,  // Slower, 50 bits of accuracy
      }
      
      pub fn lambert_w0(z: f64, mode: LambertWAccuracyMode) -> f64;
      pub fn lambert_wm1(z: f64, mode: LambertWAccuracyMode) -> f64;
    • Write default Lambert W function for prelude (Precise as default)

      use peroxide::prelude::*;
      
      fn main() {
          lambert_w0(1.0).print(); // Same as fuga::lambert_w0(1.0, LambertWAccuracyMode::Simple)
      }

Release 0.37.7 (2024-07-05)

  • Bump pyo3 dependency to 0.22
  • Fix plot functions to be compatible with pyo3
  • Add B-Spline to README

Release 0.37.6 (2024-06-19)

Huge Spline Change

  • Generic Spline trait
    • Spline<T>: desired output type is T
  • Split PolynomialSpline from Spline
    • CubicSpline & CubicHermiteSpline are now PolynomialSpline
    • Implement Spline<f64> for PolynomialSpline
  • Implement B-Spline
    • BSpline { degree: usize, knots: Vec<f64>, control_points: Vec<Vec<f64>> }
    • BSpline::open(degree, knots, control_points) : Open B-Spline
    • BSpline::clamped(degree, knots, control_points) : Clamped B-Spline
  • Implement Spline<(f64, f64)> for BSpline

Release 0.37.5 (2024-06-10)

  • More generic & stable root finding macros (except Newton)

Release 0.37.4 (2024-05-17)

  • Public ODE Integrator fields

Release 0.37.3 (2024-05-01)

  • Add Nan/infinite guard to gauss_kronrod_quadrature (early exit) (#59) (Thanks to @GComitini)
  • Add complex feature & complex module (#35)
  • Implement Cubic B-Spline basis functions
    • UnitCubicBasis
    • CubicBSplineBases

Release 0.37.2 (2024-04-16)

  • Do not include legend box if there is no legend (#58) (Thanks to @GComitini)
  • Add rtol field to BroydenMethod
  • Implement high-level macros for root finding
    • bisection!(f, (a,b), max_iter, tol)
    • newton!(f, x0, max_iter, tol) (require #[ad_function] attribute)
    • secant!(f, (a,b), max_iter, tol)
    • false_position!(f, (a,b), max_iter, tol)

Release 0.37.1 (2024-04-15)

  • Implement BrodenMethod: Broyden's method (I>=1, O>=1, T=([f64; I], [f64; I]))
  • Restore citation file

Release 0.37.0 (2024-04-14)

Huge Update - Whole new Root finding & anyhow

Whole new Root finding

  • Remove all boilerplates
  • Now, RootFinding is composed of traits
    • RootFindingProblem<const I: usize, const O: usize, T>: Trait for defining and root finding problem
      • I: Input dimension
      • O: Output dimension
      • T: Type of state
    • RootFinder: Trait for finding root
      • BisectionMethod: Bisection Method (I=1, O=1, T=(f64, f64))
      • FalsePositionMethod: False Position Method (I=1, O=1, T=(f64, f64))
      • NewtonMethod: Newton Method (I=1, O=1, T=f64)
      • SecantMethod: Secant Method (I=1, O=1, T=(f64, f64))

Error handling with anyhow

  • Remove thiserror dependency
  • Add anyhow for error handling
  • Change error handling in ODE, Spline, WeightedUniform

Release 0.36.4 (2024-04-11)

  • More generic Butcher tableau
    • Now, you can use ButcherTableau for non-embedded methods too
  • More ODE integrators
    • RALS3, RALS4, RK5, BS23

Release 0.36.3 (2024-04-10)

  • Hotfix : Fix GL4 algorithm

Release 0.36.2 (2024-04-10)

  • Now, you can report current states if your constraints are violated.
    • ODEError::ConstraintViolation -> ODEError::ConstraintViolation(f64, Vec<f64>, Vec<f64>)
    • for detailed information, see docs for ODEError
  • Add docs for ODEError

Release 0.36.1 (2024-04-09)

  • Fix all warnings in peroxide

  • Change redundant method

    • Vec<f64>::resize -> Vec<f64>::reshape
  • Error handling for concatenation

    • cbind & rbind now returns Result<Matrix, ConcatenateError>
  • New non-macro utils

    • column_stack(&[Vec<f64>]) -> Result<Matrix, ConcatenateError>
    • row_stack(&[Vec<f64>]) -> Result<Matrix, ConcatenateError>
    • rand_with_rng(usize, usize, &mut Rng) -> Matrix
  • Generic Butcher tableau trait (now for embedded Runge-Kutta methods)

    pub trait ButcherTableau {
        const C: &'static [f64];
        const A: &'static [&'static [f64]];
        const BH: &'static [f64];
        const BL: &'static [f64];
    
        fn tol(&self) -> f64;
        fn safety_factor(&self) -> f64;
        fn max_step_size(&self) -> f64;
        fn min_step_size(&self) -> f64;
        fn max_step_iter(&self) -> usize;
    }
    • Implement ODEIntegrator for ButcherTableau

      • Just declare ButcherTableau then step is free
    • Three available embedded Runge-Kutta methods

      • RKF45: Runge-Kutta-Fehlberg 4/5th order
      • DP45: Dormand-Prince 4/5th order
      • TSIT45: Tsitouras 4/5th order

Release 0.36.0 (2024-04-08)

Huge Update - Error handling & Whole new ODE

Error handling

  • Add thiserror for error handling
  • Implement errors for cubic spline & cubic hermite spline.
  • Implement errors for weighted uniform distribution & PRS.

Seedable sampling

  • Now, all distribution has sample_with_rng method.
  • There are two wrappers for SeedableRng
    • smallrng_from_seed : Performant but not secure
    • stdrng_from_seed : Performant enough and secure enough

Whole new ODE

  • Remove all boilerplates.
  • Now, ODE is composed of traits.
    • ODEProblem: Trait for defining and ODE problem.
    • ODEIntegrator: Trait for integrating ODE.
      • RK4: Runge-Kutta 4th order
      • RKF45: Runge-Kutta-Fehlberg 4/5th order
      • GL4: Gauss-Legendre 4th order
      • You can implement your own integrator.
    • ODESolver: Trait for solving ODE.
      • BasicODESolver: Basic ODE solver - define range of t, initial step size and integrate it.
      • You can implement your own solver.
  • For more information, see docs for ode.

Release 0.35.1 (2024-03-29)

  • Add PlotType for Plot2D
    • PlotType::Scatter
    • PlotType::Line (default)
    • PlotType::Bar

Release 0.35.0 (2024-03-29)

Change some plot functions

  • Now you can set marker, line style, color, alpha option for specific element.
    • set_marker(vec![(usize, Marker)]) : usize is index of element (image or pair)
    • set_line_style(vec![(usize, LineStyle)])
    • set_color(vec![(usize, String)])
    • set_alpha(vec![(usize, f64)])

Release 0.34.7 (2024-03-11)

More updates for plot feature

  • Make legend optional (Now, no legend is available)
  • Implement set_line_style. Here are available line styles.
    • LineStyle::Solid
    • LineStyle::Dashed
    • LineStyle::Dotted
    • LineStyle::DashDot
  • Implement set_color
  • Implement set_alpha
  • More markers.

Getter for ODE

  • Add explicit getter for ExplicitODE and ImplicitODE for various fields.

Release 0.34.6 (2024-03-01)

Big updates for plot feature

  • Add auto-initialize flag for pyo3
  • Add scienceplots support. Here are available styles.
    • PlotStyle::Default : default matplotlib style - no scienceplots required
    • PlotStyle::Science : scienceplots default style - scienceplots required
    • PlotStyle::Nature : nature style - scienceplots required
    • PlotStyle::IEEE : IEEE style - scienceplots required
  • Implement xscale, yscale, xlim, ylim for Plot2D
  • You can check these features in Peroxide Gallery

Release 0.34.5 (2024-02-08)

  • Derive Serialize and Deserialize for CubicHermiteSpline

Release 0.34.4 (2024-01-28)

  • Derive Serialize and Deserialize for Matrix
  • Remove explicit implementation for Default for Shape

Release 0.34.3 (2023-11-25)

  • Update peroxide-num to v0.1.4
  • Implement ExpLogOps, PowOps, TrigOps and Numeric<f64> for Matrix

Release 0.34.2 (2023-11-20)

New sub-crate : peroxide-num

  • Add new sub-crate : peroxide-num
  • Change all dependencies of ExpLogOps, PowOps, TrigOps to peroxide-num

Fix errata

  • R example in structure/matrix (#56) (Thanks to @rdavis120)

Fix old syntax

  • Fix old syntax - e.g. explicit into_iter, Vec::with_capacity & set_len

Release 0.34.1 (2023-08-03)

Modify Statistics of WeightedUniform

Add more Vec<f64> algorithms

  • Implement arg_min, max, min

Release 0.34.0 (2023-06-13)

Change Gauss-Kronrod quadrature

  • Adapt max iteration number to Gauss-Kronrod quadrature

    • Arguments of all methods related with Gauss-Kronrod quadrature are changed.
    • e.g. G7K15(1e-15) -> G7K15(1e-15, 20) (20 is maximum iteration)
  • Example

    use peroxide::fuga::*;
    
    fn main() {
        let f_integral = integrate(f, (0f64, 1f64), G7K15R(1e-4, 20));
        f_integral.print();
    }
    
    fn f(x: f64) -> f64 {
        x.powi(2)
    }

Release 0.33.5 (2023-06-13)

  • Implement Gauss-Kronrod quarature with relative error
    • G7K15R, G10K21R, G15K31R, G20K41R, G25K51R, G30K61R can be used.
  • Reduce warning messages

Release 0.33.4 (2023-06-04)

  • Implement Statistics for WeightedUniform (#55) (Thanks to @samnaughtonb)
  • New trait: FloatWithPrecision
    • fn round_with_precision(&self, precision: usize) -> Self
    • fn floor_with_precision(&self, precision: usize) -> Self
    • fn ceil_with_precision(&self, precision: usize) -> Self
  • New utils:
    • fn seq_with_precision(start, end, step, precision: usize) -> Vec<f64>
    • fn linspace_with_precision(start, end, length, precision: usize) -> Vec<f64>

Release 0.33.2 (2023-04-03)

  • Implement necessary traits for ConfusionMatrix
    • #[derive(Debug, Clone, PartialEq)]
  • Bump up dependencies version
    • netcdf : 0.7.0 -> 0.8.1
    • arrow : 0.14 -> 0.17.0
    • pyo3: 0.17 -> 0.18

Release 0.33.1 (2023-03-14)

  • Implement ConfusionMatrix in statistics::stat

Release 0.33.0 (2023-03-08)

  • Delete build.rs to remove any explicit linkages to specific BLAS implementations (#54) (Thanks to @gfaster)

Release 0.32.1 (2022-11-04)

  • Make an option for choosing compression method for parquet
    • At fuga : fn write_parquet(&self, path: &str, compression: CompressionOptions)
    • At prelude : fn write_parquet(&self, path:&str) (Default: CompressionOptions::Uncompressed)

Release 0.32.0 (2022-11-03)

DataFrame meets Parquet

  • Add parquet feature
  • Add WithParquet trait and implement it for DataFrame
    • fn write_parquet(&self, path: &str) -> Result<(), Box<dyn Error>>
    • fn read_parquet(path: &str) -> Result<Self, Box<dyn Error>>
    • Update DataFrame docs

Release 0.31.8 (2022-10-11)

  • Change debug procedure for stop condition of ODE (#52) (Thanks to @tchamelot)
    • Add fn has_stopped(&self) -> bool for ODE struct

Release 0.31.7 (2022-09-21)

  • Fix bug in linspace (#51)
  • Change print scheme of Vec<float>
    • Now, floating number in Vec is printed by fmt_lower_exp(2)

Release 0.31.6 (2022-07-15)

  • Add *_with_cond for Spline trait (See Truncated Cubic - Peroxide Gallery for an example)
    • eval_with_cond<F: Fn(f64) -> f64>(&self, x: f64, cond: F) -> f64 : Evaluate with custom condition
    • eval_vec_with_cond<F: Fn(f64) -> f64 + Copy>(&self, v: [&f64], cond: F) -> f64 : Evaluate vector with custom condition

Release 0.31.5 (2022-07-06)

  • New trait - LowerExpWithPlus, UpperExpWithPlus
    • Now, we can print 132.45 as 1.3245e+2 via 132.45.fmt_lower_exp(4)
    • Now, we can print 132.45 as 1.3245E+2 via 132.45.fmt_upper_exp(4)
  • Change print scheme of DataFrame
    • Now, floating number in DataFrame is printed by fmt_lower_exp(2)

Release 0.31.4 (2022-06-15)

  • Fix bug in rref (#50)

Release 0.31.3 (2022-05-29)

  • Fix bug in linspace and logspace
    • Now linspace(0, 0, 1) returns [0f64] instead of [NaN]
    • Now logspace(0, 0, 1, 10) returns [1f64] instead of [NaN]

Release 0.31.2 (2022-05-29) (Yanked)

  • Fix assertion of util::non_macro::seq
  • Implement numpy like logspace

Release 0.31.1 (2022-05-24)

  • Fix a bug in spread of DataFrame

Release 0.31.0 (2022-05-19)

Significant changes

Splines

  • New trait Spline
    • Move CubicSpline::eval to Spline::eval
    • Move CubicSpline::polynomial to Spline::polynomial_at
    • Move CubicSpline::number_of_polynomials to Spline::number_of_polynomials
    • Add Spline::eval_vec
    • Add Spline::get_ranged_polynomials
  • Implement Cubic Hermite spline
    • Add struct CubicHermiteSpline
    • Implement slope estimation algorithms
      • SlopeMethod::Akima
      • SlopeMethod::Quadratic
  • Modify CubicSpline (Important!)
    • Change argument type
      • from_nodes(node_x: &[f64], node_y: &[f64]) -> Self
    • (For developer) Remove CubicSpline::ranged (use util::useful::zip_range instead)
  • Add docs for numeric/spline.rs

Calculus

  • Rename Calculus::diff to Calculus::derivative (Important!)

Minor updates

  • Add util::useful::{gen_range, zip_range}
  • Add structure::poly::Calculus::integrate

Release 0.30.15 (2022-05-02)

  • Update puruspe to 0.2.0 (Fix a bug in gamma function)

Release 0.30.14 (2022-03-22)

  • New distribution : WeightedUniform
  • New sampling method : PRS (Piecewise Rejection Sampling)
  • Documentation for these new methods will be added later.

Release 0.30.13 (2022-02-21)

  • Control lambda of LevenbergMarquardt (#49)
    • Add set_lambda_init & set_lambda_max (#49)

Release 0.30.12 (2022-02-21)

  • More flexible root finding
    • Add getter methods for RootFinder
    • Add getter methods for RootState

Release 0.30.11 (2022-02-10)

  • Implement Cholesky decomposition in O3 feature.
  • Implement symmetricity check method - is_symmetric for Matrix.

Release 0.30.10 (2022-02-05)

  • Update netcdf dependency to 0.7
    • Fix nc feature issue - not compatible with hdf5 version 1.12.0
  • Update pyo3 dependency to 1.15
  • Update float-cmp dev dependency to 0.9

Release 0.30.9 (2021-05-26)

  • Add more trigonometric ops
    • asin_acos(&self) -> (Self, Self)
    • asinh_acosh(&self) -> (Self, Self)
  • Update dependencies
    • blas : 0.21.0 -> 0.22.0
    • lapack : 0.17.0 -> 0.19.0

Release 0.30.8 (2021-05-21)

  • Fix errata in col_map, row_map

Release 0.30.7 (2021-05-14)

  • Change signature of cubic_spline
    • Originally, (Vec<f64>, Vec<f64>) -> Vec<Polynomial>
    • Now, (&Vec<f64>, &Vec<f64>) -> CubicSpline
  • Add Truncated SVD
    • Add truncated(&self) method for SVD

Release 0.30.6 (2021-03-31)

  • Fix a bug in quantile of statistics/stat.rs

Release 0.30.5 (2021-03-26)

  • Update docs
    • prelude/mod.rs : Update default numerical integration method
  • Update matrixmultiply dependency
    • Add threading feature
    • Enhance matrix multiplication performance : See matmul

Release 0.30.4 (2021-03-01)

  • Update dependencies
    • rand : 0.7 -> 0.8
    • rand_distr : 0.3 -> 0.4
    • matrixmultiply : 0.2 -> 0.3
    • netcdf : 0.5 -> 0.6
    • blas : 0.20 -> 0.21
    • lapack : 0.16 -> 0.17
    • pyo3 : 0.12 -> 0.13

Release 0.30.3 (2021-01-26)

  • Automatic generated gradient & hessian via proc_macro
    • Currently only support Fn(f64) -> f64
use peroxide::fuga::*;

fn main() {
    f(2f64).print();        // x^3     = 8
    f_grad(2f64).print();   // 3 * x^2 = 12
    f_hess(2f64).print();   // 6 * x   = 12
}

#[ad_function]              // generates f_grad, f_hess
fn f(x: f64) -> f64 {
    x.powi(3)               // x^3
}

Release 0.30.2 (2021-01-21)

  • Implement Gauss-Kronrod Quadrature
    • G7K15
    • G10K21
    • G15K31
    • G20K41
    • G25K51
    • G30K61
  • Now, prelude's default integration is G7K15(1e-16)

Release 0.30.1 (2021-01-20)

  • Implement Chebyshev polynomial
  • Implement more higher order Gauss-Legendre Quadrature (Up to 30)

Release 0.30.0 (2021-01-14)

Independence day from Dual

  • Replace all Dual, HyperDual, Number with AD
    • Remove Dual, HyperDual, Number
  • It affected all of numerical functions
    • numerical/root.rs
    • numerical/ode.rs
    • numerical/optimize.rs
    • numerical/utils.rs
  • Also many traits are changed
    • traits/num.rs
    • traits/pointer.rs

Minor Changes

  • No more default in util::non_macro::concat
  • Now, VecOps has default implmentations - It required FPVector

Release 0.29.1 (2021-01-13)

  • Implements all numerical operations of AD
    • Inverse trigonometric: asin, acos, atan
    • Inverse hyperbolic: asinh, acosh, atanh
    • Power of AD: pow(&self, other: AD) -> Self

Release 0.29.0 (2021-01-13)

Diet

  • Remove all proc_macro (Remove dependency of peroxide-ad)
    • Now, AD are enums
      • AD0(f64)
      • AD1(f64, f64)
      • AD2(f64, f64, f64)
  • csv becomes optional
    • Remove dependency of csv, serde, iota, ...

Release 0.28.2 (2021-01-12)

  • Reduce compile time via watt integration
    • Now, peroxide-ad is pre-compiled to wasm

Release 0.28.1 (2020-12-22)

  • Fix dimension error of apply in O3 feature
  • Import structure/dataframe.rs into prelude
  • Update version of README.md

Release 0.28.0 (2020-12-21)

Rebirth of DataFrame

  • Now, DataFrame can contain multiple type columns. Refer to dataframe.
  • DataFrame is merged default feature. No more dataframe feature required. Thus, dataframe feature is removed.
  • But if you want to netcdf file format, then nc feature is required.

Minor changes

  • Fix errata in README.md
  • Remove unnecessary imports

Release 0.27.1 (2020-10-28)

  • Add doc for Matrix::qr & Matrix::svd
  • Enhance doc for Matrix::pseudo_inv
  • Implement pseudo_inv via svd (O3 feature only)

Release 0.27.0 (2020-10-12)

  • Update dependencies
    • indexmap : 1.5 -> 1.6
    • pyo3 : 0.11 -> 0.12
  • Add print for &Vec<T>

Release 0.26.4 (2020-09-24)

  • Fix dimension error of SVD.u

Release 0.26.3 (2020-09-24)

SVD

  • Add svd to Matrix (Only available in O3 feature)

Minor changes

  • Remove packed_simd dependency (Fix packed_simd error)
  • Add O3 version of qr (using lapack_dgeqrf)

Release 0.26.2 (2020-09-23)

  • Add more sugar for Vec<f64>
    • ConvToMat : Convert Vec<f64>
    • to_col : To Column matrix
    • to_row : To Row matrix

Release 0.26.1 (2020-09-23)

  • Add new methods for Matrix
    • submat(&self, start: (usize, usize), end: (usize, usize)) : Return submatrix
    • subs_mat(&mut self, start, end, &Matrix) : Substitute submatrix

Release 0.26.0 (2020-08-28)

  • Update netcdf dependencies
    • Now, use netcdf = 0.5
  • Add new methods for DataFrame
    • head_print(&self, n: usize) : Return n lines from head
    • tail_print(&self, n: usize) : Return n lines before tail

Release 0.25.8 (2020-08-28)

  • Change licenses : BSD-3-Clause -> MIT OR Apache-2.0
  • Update version of dependencies

Release 0.25.7 (2020-08-08)

  • Implement more Vector Products
    • cross
    • outer
  • Implement more Matrix Products
    • kronecker
    • hadamard

Release 0.25.6 (2020-08-06)

  • Add assertion for matrix multiplications

Release 0.25.5 (2020-08-04)

  • Implement Binomial distribution

Release 0.25.4 (2020-08-01)

  • Reduce compile time
    • Reduce order of AD{i} : 10 -> 5

Release 0.25.3 (2020-07-31)

Root Finding is available

  • Add numerical/root.rs (See docs)
    • Low-level API
    • High-level API
  • Add ADLift<F, T> for lifting generic AD function

Release 0.25.2 (2020-07-23)

  • Impl std::ops with f64 for AD{i} and vice versa
  • Increase Accuracy of Spline Extension (Thanks to schrieveslaach)

Release 0.25.1 (2020-07-17)

  • Integrate src/structure/ad.rs into prelude
  • Add generic automatic differenitation trait - AD

Release 0.25.0 (2020-07-15)

Higher order Automatic Differentiation

  • Add structure/ad.rs
  • Add peroxide-ad (proc_macro for AD)
  • Implement AD1 ~ AD10 (Upto 10th order)
  • Modify traits/num.rs
    • Change some methods to provided methods

Release 0.24.5 (2020-06-18)

  • Add get_env(&self) in ExplicitODE
  • Add get_env(&self) in ImplicitODE

Release 0.24.4 (2020-06-18)

  • Fix set_header error of DataFrame

Release 0.24.3 (2020-06-18)

Solve ODE with Environment

  • Add Environment trait in numerica/ode.rs
    • ODE -> ODE<E: Environment>
    • ExplicitODE -> ExplicitODE<E: Environment>
      • f: Fn(&mut State<f64>) -> f: Fn(&mut State<f64>, &E)
      • Add set_env(E)
    • ImplicitODE -> ImplicitODE<E: Environment>
      • f: Fn(&mut State<Dual>) -> f: Fn(&mut State<Dual>, &E)
      • Add set_env(E)

Release 0.24.2 (2020-06-18) (Yanked)

Release 0.24.1 (2020-06-16)

  • Fetch prelude with new Linear algebra
    • Add SimpleLinearAlgebra

Release 0.24.0 (2020-06-16)

Whole new LU

  • Fix error in LinearAlgebra::lu
    • Add gepp, gecp for partial pivoting and complete pivoting
    • Peroxide chooses gecp default
  • No more unwrap
    • lu returns PQLU directly
    • inv returns Matrix directly
    • pseudo_inv returns Matrix directly

Now, we can solve!

  • Implement two solve algorithms
    • LU decomposition via Gaussian elimination with Complete pivoting (Stable)
    • WAZ decomposition (Unstable)

Example

#[macro_use]
extern crate peroxide;
use peroxide::fuga::*;

fn main() {
    let a = ml_matrix("1 2;3 4");
    let b = c!(3, 7);
    
    a.solve(&b, LU).print();    // [1, 1]
    a.solve(&b, WAZ).print();   // [1, 1]
}

Release 0.23.2 (2020-06-10)

  • Fix errata in Sub of Redox

Release 0.23.1 (2020-06-10)

More Tests

  • Add tests/linalg.rs : It compares peroxide and julia with test_data/*.nc

More sugar

  • Add traits/sugar.rs
    • VecOps : Vector operation with vectors and scalars
    • Scalable : Easy to resize vector or matrix and also concatenation

More functional

  • Add col_reduce, row_reduce

Release 0.23.0 (2020-06-01)

[Caution!] Huge Update!

Change module re-exporting

No more direct re-exporting. Below code is not allowed.

extern crate peroxide;
use peroxide::*;

Now, peroxide has two re-export options - prelude and fuga.

  • prelude: To use simple
  • fuga: To control numerical algorithms

For example,

// Prelude
#[macro_use]
extern crate peroxide;
use peroxide::prelude::*;

fn main() {
    let a = c!(1, 2, 3);
    assert_eq!(a.norm(), 14f64.sqrt());
}
// Fuga
#[macro_use]
extern crate peroxide;
use peroxide::fuga::*;

fn main() {
    let a = c!(1, 2, 3);
    assert_eq!(a.norm(Norm::L2), 14f64.sqrt());
}

New module: traits

  • Remove operation
  • Create traits

traits contains below submodules.

  • fp.rs : Functional Programming toolbox
  • general.rs : General algorithms
  • math.rs : Mathematical traits
  • mutable.rs : Mutable toolbox
  • num.rs : Real & Number & Various Ops
  • pointer.rs : Redox<T: Vector> & MatrixPtr

Specify Rust edition

  • From Ver 0.23.0, peroxide uses 2018 edition.

Change Matrix - Vec<f64> multiplication

  • From ver 0.23.0, Matrix * Vec<f64> = Vec<f64> and vice versa.

Minor changes

  • Replace norm_l*() as norm(Norm::L*)
  • Move interp::lagrange_polynomial, special::legendre::legendre_polynomial to structure/polynomial.rs
  • Remove LinearOps in structure/matrix.rs
    • Replace to_matrix(&self) with Into<Matrix>
    • Replace from_matrix(&self) with Into<Vec<f64>>
    • Move transpose(), t() to Matrix::transpose(), Matrix::t()
  • Remove VecOps in structure/vec.rs
    • Replace add, sub, s_mul with traits::math::Vector
    • Replace norm() with traits::math::Normed
    • Replace dot() with traits::math::InnerProduct
    • Use Redox<T: Vector> rather than VecOps (Refer to traits/pointer.rs)
  • Remove special/legendre.rs
  • Add gemv, gevm in structure/matrix.rs

Release 0.22.0 (2020-05-25)

Add Numerical integration

  • numerical/integral.rs
    • Newton Cotes quadrature - integrate(f, (a, b), NewtonCotes(usize))
    • Gauss Legendre quadrature - integrate(f, (a, b), GaussLegendre(usize))

More MutOps

  • swap_with_perm : Swap with permutation

More CubicSpline (By schrieveslaach)

  • polynomial(&self, x: T) -> Polynomial : Returns a reference the Polynomial at the given point x.

More Vector::norm (By nateckert)

  • Add more norm for Vec<f64>: norm_l1(&self), norm_l2(&self), norm_linf(&self), norm_lp(&self)

TODO

  • Gaussian elimination with LU decomposition
  • Perm * Matrix : Syntactic sugar for swap_with_perm(_, Row)
  • Matrix * Perm : Syntactic sugar for swap_with_perm(_, Col)
  • More numerical integrations
  • Unify vector norms
  • Make csv to optional

Release 0.21.7 (2020-04-22)

More LinearAlgebra

  • QR Decomposition
    • Add qr(&self) -> QR in LinearAlgebra trait
    • Add QR to represent QR decomposition
  • Reduced Row Echelon Form
    • Add rref(&self) -> Matrix in LinearAlgebra trait

More Efficient

  • Modify Polynomial evaluate algorithm via Horner's Method (Thanks to Nateckert)

Release 0.21.6 (2020-04-11)

  • Create util/wrapper.rs : Wrapper for other crates.
    • Trait SampleRNG : Extract random sample from Vec<T>
      • sample(&self, n: usize) -> Vec<Self::Item>
  • More Printable
    • Vec<usize>, Vec<u32>, Vec<u64>
    • Vec<isize>, Vec<i32>, Vec<i64>

Release 0.21.5 (2020-04-02)

  • Fix a bug for det, inv & pseudo_inv for large matrix
    • Set precision of lu to more lower : 1e-7 to 1e-40

TODO

  • QR decomposition
  • Effective pseudo inverse algorithm using QR
  • Enhance performance of Matrix

Release 0.21.4 (2020-03-21)

Important

  • New dependency - matrixmultiply
  • Change default matrix multiplication behavior - depend on matrixmultiply
  • If size of matrix is smaller than 1000 x 1000, default is faster than O3
  • New function - gemm : Wrapper of dgemm of matrixmultiply
    • gemm(alpha, A, B, beta, C) : C = alpha * A * B + beta * C

Release 0.21.3 (2020-03-21)

  • Add operation/row_ops.rs
    • Add RawMatrix
    • row_ptr(&self, usize) -> Vec<*const f64>
    • col_ptr(&self, usize) -> Vec<*const f64>
  • Add as_slice, as_mut_slice for Matrix
  • Add ptr_to_vec in util/low_level

Release 0.21.2 (2020-03-17)

Important

  • Add Eigen
    • Implement jacobi method

Example

extern crate peroxide;
use peroxide::fuga::*;

fn main() {
    let a = MATLAB::new("1 2; 2 3");
    let eigen = eigen(&a, Jacobi);
    let (eig_val, eig_vec) = eigen.extract();

    eig_val.print();
    eig_vec.print();
}

Release 0.21.1 (2020-03-03)

Important

  • Modify PowOps
    • Rename powf(&self, Self) to pow(&self, Self)
    • Create powf(&self, f64)

Other enhancement

  • Implement std::ops for RedoxVector
  • Implement PowOps for RedoxVector
  • Update Documents

Release 0.21.0 (2020-03-01)

Independence day of special

Important

  • Remove dependencies - special, special-fun
    • Now, use special functions & distributions for WASM.
  • New dependency - puruspe (PURe RUSt SPEcial function library)
  • Re-implement special functions by puruspe
    • ln_gamma
    • gamma
    • inc_gamma
    • inv_inc_gamma
    • beta
    • inc_beta
    • inv_inc_beta
    • erf
    • erfc
    • inv_erf
    • inv_erfc

Release 0.20.3 (2020-02-28)

  • Add Div for Matrix

Release 0.20.2 (2020-02-27)

Hotfix

  • Revert cfg(feature="special") as cfg(feature="specials") for WASM.
    • specials = ["special", "special-fun"]

TODO

  • Implement special functions by pure Rust.

Release 0.20.1 (2020-02-26)

Release 0.20.0 (2020-02-25)

Important

  • New dependencies
    • order-stat : For ordered statistics
    • float-cmp : To compare floating numbers conveniently
    • special-fun : To use additional special functions
  • OrderedStat
    • Now, we can calculate quantile (perfectly matched with R quantile)
    • Implemented list
      • Type1
      • Type2
      • Type3, ... , Type 9
  • Remove special feature - Now, special, special-fun are necessary dependencies.
  • New method over RNG trait. - cdf

Other Enhancement

Added

  • Some additional R macros
    • rnorm
    • dnorm
    • prorm
  • Some additional special functions
    • inc_beta : Regularized incomplete Beta integral
    • inc_gamma : Regularized incomplete lower Gamma integral
    • hyp2f1 : Hypergeometric function

Modified

  • Update REAME.md
  • Fix comments of plot.rs

Release 0.19.4 (2020-01-30)

  • Modify vector
    • Replace last native with O3
    • Add sum to VecOps
  • Modify documentation of dist
    • Remove checkbox
    • Replace ~ with <del> tag

Release 0.19.3 (2019-12-21)

  • Remove travis-ci error in examples
  • Remove some legacy codes
  • No differences with 0.19.2

Release 0.19.2 (2019-12-21)

  • Remove test errors of dataframe.rs

Release 0.19.1 (2019-12-21) (Yanked)

  • New dependency - rand_distr
    • Now, any distributions are depend on rand_distr
  • Add StudentT distribution
  • Rename example to examples
    • Now use cargo build --examples. But it should require all features so, not recommended. Instead of this, you can see real examples in Peroxide Gallery.

Release 0.19.0 (2019-12-19)

  • New dependency in dataframe feature - json
  • Add WithJSON trait in dataframe.rs
  • Implement WithJSON for DataFrame
    • to_json_value
    • from_json_value

Release 0.18.6 (2019-12-05)

  • Add missing trait bound for Real trait
  • Fix error of plot.rs
    • Change python library dependency : pylab -> matplotlib.pyplot

Release 0.18.5 (2019-11-30)

  • [Hotfix] Fix spacing bug for r>100 cases.

Release 0.18.4 (2019-11-29)

  • Fix spacing constraint - space should be larger than length of key

Release 0.18.3 (2019-11-29)

  • Fix global spacing of dataframe to column-wise spacing.

Release 0.18.2 (2019-10-23)

  • Improve generic of jacobian

Release 0.18.1 (2019-10-07)

  • Fix limitation of key length: 5 -> unlimited

Release 0.18.0 (2019-10-06)

Important

  • Rename feature : oxidize -> O3

Other enhancement

Added

  • Cubic spline structure (By schrieveslaach)
  • Add documentation for DataFrame

Modified

  • structure::DataFrame::WithNetCDF
    • Modify read_nc(file_path: &str, header: Vec<&str>) -> read_nc(file_path: &str)
    • Add read_nc_by_header(file_path: &str, header: Vec<&str>)

Release 0.17.3 (2019-10-03)

  • Implement Statistics for DataFrame

Release 0.17.2 (2019-10-02)

  • With surge, new documentation web sites available - peroxide.info

Release 0.17.0 (2019-10-01)

DataFrame

Added

  • structure/dataframe.rs

New dependency

  • indexmap
  • netcdf

New feature

  • dataframe

Implement level for DataFrame

  • Pretty print
  • Able to print different length
  • Convert to Col matrix
  • Initialize with header
  • Call by header (Index with header)
  • Call by row
  • Insert pair
  • Insert row
  • IndexMut with header
  • Any column operations
  • Read from csv
  • Write to csv
  • Read from netcdf
  • Write to netcdf

Release 0.16.5 (2019-09-26)

  • Remove NumError for Number
  • Add PartialOrd for Number, Dual, HyperDual

Release 0.16.4 (2019-09-26)

Safe Optimization

Modified

Remove unnecessary assertions

  • structure::dual::ExpLogOps::ln
  • structure::hyperdual::Div
  • structure::hyperdual::ExpLogOps::ln

Safe optimization

  • numerical::optimize
    • F: Fn(&Vec<f64>, Vec<Number>) -> Option<Vec<Number>>

Release 0.16.3 (2019-09-23)

More mutable operations

Added

  • util::low_level
    • unsafe fn copy_vec_ptr(dst: &mut Vec<*mut f64>, src: &Vec<f64>)
    • unsafe fn swap_vec_ptr(lhs: &mut Vec<*mut f64>, rhs: &mut Vec<*mut f64>)

Modified

  • structure::matrix::Matrix::swap -> operation::mut_ops::MutMatrix::swap
    • Now swap becomes mutable function

Release 0.16.2 (2019-09-21)

  • Now, we can insert pair of data to plot
    • fn insert_pair(&self, pait: (Vec<f64>, Vec<f64>)) -> &mut Self

Release 0.16.1 (2019-09-19)

  • More generic optimize
    • function pointer -> Box<F>

Release 0.16.0 (2019-09-14)

Now, peroxide meets low level

Added

  • operation::mut_ops::MutMatrix
    • fn col_mut(&mut self, idx: usize) -> Vec<*mut f64>
    • fn row_mut(&mut self, idx: usize) -> Vec<*mut f64>
  • structure::Matrix::FP::{col_mut_map, row_mut_map}

Modified

  • structure::matrix::Matrix
    • fn ptr(&self) -> *const f64
    • fn mut_ptr(&self) -> *mut f64
    • Index for Matrix
    • IndexMut for Matrix

Example

fn main() {
    // ===================================
    // Low Level
    // ===================================
    let mut a = ml_matrix("1 2; 3 4");
    a.print();
    //      c[0] c[1]
    // r[0]    1    2
    // r[1]    3    4

    unsafe {
        let mut p: Vec<*mut f64> = a.col_mut(1); // Mutable second column
        for i in 0 .. p.len() {
            *p[i] = i as f64;
        }
    }

    a.print();
    //      c[0] c[1]
    // r[0]    1    0
    // r[1]    3    1
    
    // ===================================
    // High Level
    // ===================================
    let mut b = ml_matrix("1 2 3; 4 5 6");
    b.col_mut_map(|x| x.normalize());
    b.print();
    //        c[0]   c[1]   c[2]
    // r[0] 0.2425 0.3714 0.4472
    // r[1] 0.9701 0.9285 0.8944
}

Release 0.15.3 (2019-09-12)

  • Smart pointer of Vector - RedoxVector
  • SIMD integrated - packed_simd
  • Revive Gauss-Legendre 4th order ODE solver

Release 0.15.2 (2019-09-04)

  • Come back to Travis-CI (only default feature)
  • Legendre Polynomial (legendre_polynomial(n: usize) -> Polynomial)
  • Gauss-Legendre Quadrature based on numerical table (up to n=16)

Release 0.15.1 (2019-08-29)

  • More optimization of vector.rs
  • Can use openblas feature in ode.rs

Release 0.15.0 (2019-08-27)

  • [Important] More features
    • You can choose next features
      • openblas : BLAS & LAPACK back-end
      • plot : Plot with matplotlib (depends on pyo3 - should use nightly compiler)
  • More BLAS
    • Vector & Vector Addition/Subtraction (daxpy)
    • Vector & Scalar multiplication (dscal)
    • Vector & Vector dot product (ddot)
    • Vector Euclidean norm (dnrm2)
  • More LAPACK
    • QR decomposition (dgeqrf)
      • get Q,R (dorgqr)
    • get Condition number (dgecon)

Release 0.14.0 (2019-08-24)

  • [Important] Finally, BLAS integrated.
    • You can choose blas, lapack by native features.

      cargo build --features native
    • Default features are no BLAS (Pure Rust)

      cargo build
    • To use BLAS in Rust can be bothered. Should refer to OpenBLAS for Rust

    • BLAS implemented Ops

      • Matrix & Matrix Addition/Subtraction (daxpy)
      • Matrix & Scalar Addition/Subtraction (daxpy)
      • Matrix & Matrix Multiplication (dgemm)
      • Matrix & Vector Multiplication (dgemv)
    • LAPACK implemented ops

      • LU Factorization (dgetrf)
      • Inverse by LU (dgetri)
      • Solve by LU (dgetrs)
  • Move unnecessary bin files to example directory

Release 0.13.0 (2019-08-11)

  • [Important] Remove inefficient things
    • Remove util/pickle.rs
    • Remove serde, serde-pickle dependencies
  • Optimize original code
    • Matrix
      • change_shape
      • col(usize), row(usize)
      • diag
      • subs_col, subs_row
      • Add<Matrix>
      • Mul<Matrix> - Block matrix multiplication

Release 0.12.4 (2019-08-09)

  • Add normalize for Vec<f64>
  • Add col_map for Matrix
  • Add row_map for Matrix

Release 0.12.3 (2019-07-31)

  • Add get_error for Optimizer
    • Now, we can see root mean square error of Optimizer
  • Optimizer documents
  • Change non-reasonable syntax
    • set_legends -> set_legend (in util/plot.rs)

Release 0.12.2 (2019-07-30)

  • Add set_markers for Plot2D
    • Can support Point, Circle, Line

Release 0.12.1 (2019-07-30)

  • Fix error of powf in PowOps for Number
    • Cover all cases
  • Change output type of optimize
    • Original: Matrix
    • Changed: Vec<f64>

Release 0.12.0 (2019-07-29)

  • [Important] Change the definition of powf in PowOps
    • powf(&self, Self) -> Self
    • Apply this definition to
      • Dual
      • HyperDual
      • Number
    • And remove PowOps of Vec<f64>

Release 0.11.8 (2019-07-29)

  • More utils
    • max<T>(v: Vec<T>) -> T where T: PartialOrd + Copy + Clone
    • min<T>(v: Vec<T>) -> T where T: PartialOrd + Copy + Clone
  • Implement Levenberg-Marquardt Algorithm (Refer to bin/optimize.rs)
  • to_diag for Matrix
    • to_diag : Extract diagonal matrix from a matrix
  • Add non-linear regression algorithms (Optimizations) to numerical/optimize.rs
    • Gradient Descent
    • Gauss Newton (Not yet implemented)
    • Levenberg Marquardt
  • Add julia-like macros
    • hstack! : Vectors to Column matrix
    • vstack! : Vectors to Row matrix

Release 0.11.7 (2019-07-24)

  • Modify jacobian
    • Receive Fn(Vec<Number>) -> Vec<Number>
  • Remove bdf.rs, gauss_legendre.rs
  • More extended functional programming for Vec
    • Extend zip_with to any real vector

Release 0.11.6 (2019-07-22)

  • Add extract for PQLU
    • extract: PQLU -> (p, q, l, u)

Release 0.11.5 (2019-07-20)

  • Update whole documentations - part 2.

Release 0.11.4 (2019-07-17)

  • For convenience
    • New method - to_vec of Matrix
      • Matrix to Vec<Vec<f64>>
    • Change input type of set_legends of plot.rs
      • Vec<String> -> Vec<&str>
  • Update whole documentations - part 1.

Release 0.11.3 (2019-07-14)

  • Fix performance issue in 0.11.2
    • Fix non-efficient parts of take of Matrix

Release 0.11.2 (2019-07-14)

  • Exclude bin directory
  • Apply stop_condition for ODE

Release 0.11.1 (2019-07-13)

  • Remove dependency of inline-python

Release 0.11.0 (2019-07-13)

  • [Important] Now, only nightly support (Because of pyo3)
  • Integrate with inline-python
  • Update README.md

Release 0.10.6 (2019-07-12)

  • Now, we can draw & save plot
    • New dependency - pyo3
    • Plot is implemented in util/plot.rs

Release 0.10.5 (2019-07-09)

  • Modify integrate of numerical/ode.rs
    • Now, integrate provides [param | values] matrix.
  • Change rand crate version - 0.7.0

Release 0.10.4 (2019-07-01)

  • Add Number enum for generic function input to ODE.
    • Number is composed of F(f64), D(Dual), E(NumError)
    • It replace Real trait

Release 0.10.3 (2019-06-27)

  • Modify State<T> structure. (state -> value)
    pub struct State<T> {
        param: T,
        value: Vec<T>,
        deriv: Vec<T>
    }
  • Modify ExplicitODE
    • Remove count field
  • Gitbook & README update

Release 0.10.2 (2019-06-27)

  • [Important!] Re-define ode structure
    • Great improve UI - Like SimpleWriter
    • Implement ExMethod::Euler
    • Implement ExMethod::RK4
  • Fix bug in SimpleWriter
    • Fix "always header" bug

Release 0.10.1 (2019-06-25)

  • std::ops for &Dual
  • std::ops for &HyperDual

Release 0.10.0 (2019-06-24)

Huge Updates for Ver 0.10.0

  • [Important!] Remove Rem for Matrix (Thanks to russellb23)
  • [Important!] Change Mul for Matrix
    • Mul<Matrix> for Matrix is Matrix multiplication!
  • Now, we can use std::ops for &Matrix
    extern crate peroxide;
    use peroxide::fuga::*;
    
    fn main() {
        let a = ml_matrix("1 2;3 4");
    
        (&a + &a).print();
        (&a * &a).print();
        (&a - &a).print();
    }
  • Real Trait is appeared & implemented for some types.
    • Real for f64
    • Real for Dual
    • Real for HyperDual
    extern crate peroxide;
    use peroxide::*;
    
    fn main() {
        let x_f64 = 2f64;
        let x_dual = dual(2, 1);
        let x_hyper = hyper_dual(2, 1, 0);
    
        f(x_f64).print();
        f(x_dual).print();
        f(x_hyper).print();
    }
    
    fn f<T: Real>(x: T) -> T {
        return x.powi(2);
    }
  • Implement dot product for Vec<Dual> (Thanks to russellb23)

Release 0.9.4 (2019-05-13)

  • Add log(&self, base: f64) to ExpLogOps

Release 0.9.3 (2019-05-13)

  • Implement Printable to OPDist<T>, TPDist<T>
  • New trait ParametricDist for OPDist<T>, TPDist<T> (Just extract parameters)
  • New module: util/writer.rs
    • You can write pickle file with pipelines.

Release 0.9.2 (2019-05-03)

  • Implement Arnoldi iteration & Gram-schmidt (Not yet merged)
    • bin/arnoldi.rs
    • bin/schmidt.rs
  • Add Debug, Clone to OPDist<T>, TPDist<T>

Release 0.9.1 (2019-04-15)

  • Add zeros_shape, eye_shape to util/non_macro.rs
  • Fix Matrix::from_index
    • You should use index function which returns f64

Release 0.9.0 (2019-04-08)

  • Modify Pickle trait - Allow multiple data to one pickle file
    • write_single_pickle : Just write vector or matrix to one pickle file.
    • write_pickle(&self, writer: &mut Write)
      extern crate peroxide;
      use peroxide::*;
      use std::fs::File;
      use std::io::Write;
      
      fn main () {
          let mut w: Box<Write>; 
          match File::create(path) {
              Ok(p) => writer = Box::new(p),
              Err(e) => (),
          }
      
          let a = ml_matrix("1 2;3 4");
          a.write_pickle(&mut w).expect("Can't write pickle file");
      }
  • Implement matrix norm (usage: a.norm(<input_norm>))
    • PQ(p, q) : L_pq norm
    • One : L_1 norm
    • Infinity: L_∞ norm
    • Frobenius : Frobenius norm (= PQ(2,2))

Release 0.8.13 (2019-04-01)

  • HyperDual for 2nd order Automatic Differentiation

Release 0.8.12 (2019-03-31)

  • Implement Tri-Diagonal Matrix Algorithm
    • Add tdma to numerical/utils.rs

Release 0.8.11 (2019-03-31)

  • Modify matrix/lu to correct doolittle algorithm

Release 0.8.10 (2019-03-25)

  • Add two dependencies in Cargo.toml
    • serde
    • serde_pickle
  • Add pickle.rs to util
    • Write Vec<f64> to pickle file easily
    • Write Matrix to pickle file (Caution: It depends on shape of matrix)
  • Fix all warnings from compiler

Release 0.8.9 (2019-03-24)

  • New constructor in matrix.rs
    • Matrix from index operations - from_index<F>(F, (usize, usize))
  • Update print of Matrix
    • Extend limit from 10x10 to 100x10 or 10x100 or 20x20
  • Fix bug of take of FPMatrix
    • Early return if size is smaller than row or column

Release 0.8.8 (2019-03-23)

  • Add ops.rs to statistics
    • Factorial: factorial(n)
    • Permutation: P(n,r)
    • Combination: C(n,r)
    • Combination with Repetition: H(n,r)

Release 0.8.7 (2019-03-08)

  • Add constraint to uniform distribution
  • Reduce & modify README.md
    • Add missing modules to module structure
    • Remove Usage section (Move to Peroxide Gitbook)

Release 0.8.6 (2019-03-05)

  • Add Peroxide Gitbook link to README
  • Fix statistics/rand.rs, statistics/dist.rs
    • pub use rand crate to private use
    • Now you can use rand(usize, usize) function in util/non_macro.rs

Release 0.8.5 (2019-02-17)

  • Fix bugs of cbind, rbind
  • Add Linear Discriminant (Least Square) example

Release 0.8.4 (2019-02-14)

  • Fix complete pivoting
  • Add det test in tests
  • Add tov in bin - Tolman-Oppenheimer-Volkoff equation

Release 0.8.3 (2019-02-13)

  • Fix error of Sub<Dual> for f64
  • Fix error of Div<Dual> for f64

Release 0.8.2 (2019-02-12)

  • Bump rand dependency to 0.6 (Thanks to koute)
  • Fix error of powf operation of dual
    • Now, it works fine.

Release 0.8.1 (2019-02-04)

  • Fix errors of test

Release 0.8.0 (2019-02-04) (Yanked)

  • Fix write, write_with_header
    • Move round parameter to write_round, write_with_header_round
  • Add solve_with_condition to ode.rs
    • Now, you can give stop condition to ode solver.

Release 0.7.7 (2019-01-27)

  • Add various distributions in dist.rs
    • Bernoulli(mu)
    • Beta(a, b)

Release 0.7.6 (2019-01-21)

  • Modify write, write_with_header
    • Now there is round option

Release 0.7.5 (2019-01-21)

  • Fix error of bdf.rs

Release 0.7.4 (2019-01-21)

  • Modify bdf.rs
    • Put max_iter = 10
    • Simplify non-autonomous jacobian

Release 0.7.3 (2019-01-19)

  • Move distributions(Uniform, Normal) from rand.rs to dist.rs
    • Now Uniform & Normal are enums
    • Remove Uniform::new & Normal::new
  • Add special/function.rs
    • Add gaussian

Release 0.7.2 (2019-01-18)

  • Implement GL4 - Gauss-Legendre 4th order
    • Add GL4(f64) to ODEMethod

Release 0.7.1 (2019-01-17)

  • Add take to FP trait for Matrix
  • Add skip to FP trait for Matrix
  • Fix fmt::Display of Matrix
    • If larger than 10x10 -> Only print 10x10 part
  • Add ode.rs to numeric
    • Add solve - numerical solve ODE
    • Now you can choose two methods
      • RK4
      • BDF1
  • Change rk4
    • All functions should have form
      • f(Dual, Vec<Dual>) -> Vec<Dual>
  • Fix error of spread

Release 0.7.0 (2019-01-15)

  • Modify matrix declaration
    • p_matrix -> py_matrix
    • m_matrix -> ml_matrix
    • Add r_matrix (same as matrix)
  • Add util/api.rs
    • Can choose various coding style
      • MATLAB
      • PYTHON
      • R
  • Remove CreateMatrix
    • Deprecated Matrix::new -> Use matrix instead

Release 0.6.15 (2019-01-12)

  • Update matrix.rs
    • Add p_matrix, m_matrix
      • Pythonic matrix
      • MATLAB matrix
    • Add write_with_header for matrix.rs
      • Now, can write matrix with header

Release 0.6.14 (2019-01-05)

  • Add runge_kutta.rs
    • Implement RK4 algorithm for Non-autonomous equation

Release 0.6.13 (2019-01-03)

  • Add grave
  • Move rok4a.rs to grave

Release 0.6.12 (2019-01-03)

  • Fix error of Div for Dual

Release 0.6.11 (2018-12-31)

  • Add rok4a.rs
    • Now, deprecated
  • Add non_auto_jacobian to utils
    • TODO: Generalize jacobian
  • Add bdf.rs
    • Implement Backward Euler Method

Release 0.6.10 (2018-12-27)

  • Add comfortable tools for Vec<Dual>
  • Add jacobian in numerical/utils
  • Add newton in numerical
    • Newton-Raphson Method

Release 0.6.9 (2018-12-26)

  • Fix error of inv
    • Reverse order of permutations

Release 0.6.8 (2018-12-25)

  • Update Dual
    • Also add Ops<Dual> for f64

Release 0.6.7 (2018-12-24)

  • Add multinomial.rs
    • Implement print, eval
    • TODO: Partial eval?
  • Update Dual
    • Add Add<f64> for Dual
    • Add Sub<f64> for Dual
    • Add Mul<f64> for Dual
    • Add Div<f64> for Dual

Release 0.6.6 (2018-11-30)

  • Update FPVector
    • Add filter, take, drop

Release 0.6.5 (2018-11-29)

  • Update read
    • Move read to Matrix::read
    • Can set delimiter

Release 0.6.4 (2018-11-28)

  • Add pseudo_inv method for Matrix
  • New useful.rs in util
    • Move tab, quot_rem, nearly_eq from matrix.rs to useful.rs
    • Move choose_* from polynomial.rs to useful.rs
  • Fix error of VectorOps - dot

Release 0.6.3 (2018-11-28)

  • Fix typo of fmt::Display for Polynomial
  • Fix module structures - Thanks to md-file-tree

Release 0.6.2 (2018-11-26)

  • Implement Horner's Algorithm - Div for Polynomial
  • TODO: Fix print of Polynomial (Fixed!)
  • Add Dual for Automatic Differentiation to structure
    • structure
      • matrix
      • vector
      • polynomial
      • dual
  • Make operation directory & add extra_ops.rs

Release 0.6.1 (2018-11-18)

  • Fix README

Release 0.6.0 (2018-11-18)

  • Implement Calculus for Polynomial
  • Re-construct all module structures
    • structure
      • matrix.rs
      • vector.rs
      • polynomial.rs
    • statistics
      • stat.rs
      • rand.rs
    • macros
      • r_macro.rs
      • matlab_macro.rs
    • util
      • print.rs
  • Add numerical directory
    • Add interp.rs
      • Lagrange Polynomial (lagrange_polynomial)
      • Chebyshev Nodes (chebyshev_nodes)
    • Add spline.rs
      • Natural Cubic Spline (cubic_spline)
  • Impl pow for Polynomial
  • Fixed fmt::Display for Polynomial

Release 0.5.8 (2018-11-16)

  • Add print.rs for print any values conveniently
    • Implement print for Vector
    • Implement print for Matrix
    • Implement print for f32, f64, usize, u32, u64, i32, i64
  • Add poly.rs to deal Polynomial
    • Implement fmt::Display for Polynomial
    • Add new
    • Implement eval for Polynomial
    • Implement Neg, Add, Sub, Mul<T> for Polynomial
    • Implement Mul, Add<T>, Sub<T>, Div<T> for Polynomial

Release 0.5.7 (2018-11-13)

  • Change gaussian generate method
    • marsaglia_polar to ziggurat
  • Add comments and examples to rand.rs

Release 0.5.6 (2018-11-13)

  • Add linspace to matlab_macro
  • Fixed linspace export error
  • Add rand.rs
    • Generic Rand structure
    • sample method
    • Marsaglia Polar
    • Rand to Uniform and Normal

Release 0.5.5 (2018-11-06)

  • Extend matrix macro to single valued matrix
  • Make lm
  • And also make lm macro - lm!(y ~ x)
  • Make LinearOps Trait - But not necessary

Release 0.5.4 (2018-11-05)

  • Add badges to README
  • Fix README - add cargo.toml
  • Modify std::ops for Matrix
    • f64 to generic
    • Add comments
    • Matmul for Matrix vs Vector vice versa

Release 0.5.3 (2018-11-05)

  • Add eye to matlab_macro
  • Extend zeros to matrix
  • Fix cov for Vec<f64> - not consume anymore
  • Add cor
  • Update README

Release 0.5.2 (2018-11-03)

  • Add matlab_macro

Release 0.5.1 (2018-11-02)

  • Add read
    • Can read matrix from csv
  • Add comment to write, read
  • Fix all README

Release 0.5.0 (2018-11-01)

  • Add write for Matrix
    • Can write matrix to csv!

Release 0.4.9 (2018-10-30)

  • Modify block, inv_u, combine
    • Just change code syntax

Release 0.4.8 (2018-10-30)

  • Modify lu
    • Just change code syntax

Release 0.4.7 (2018-10-30)

  • Add IndexMut implementation for Matrix
  • Modify Rem
    • Just using IndexMut
    • Very fast!

Release 0.4.6 (2018-10-29)

  • Fixed block & combine
    • Only squared matrices -> Every matrices

Release 0.4.5 (2018-10-26)

  • More add R-like macro
    • cbind
    • rbind
  • README update

Release 0.4.4 (2018-10-26)

  • Refactor structure
    • Move all macro to r_macro.rs

Release 0.4.3 (2018-10-24)

  • Add stat.rs
    • mean, var, sd
  • Modify spread
    • Fix bugs of all cases
    • Use modern syntax

Release 0.4.2 (2018-10-24)

  • Fix Cargo.toml

Release 0.4.1 (2018-10-24)

  • Replace lu with plu
  • Make Algorithm trait for Vector
    • rank, sign, arg_max
  • Change PartialEq for Matrix
    • Add nearly_eq function
    • Use nearly_eq for Matrix::eq
  • Add swap
  • Make PQLU structure
  • Remove pivot, to_perm
  • Replace plu with lu
    • lu returns Option<PQLU>
  • Enhance error handling with lu, det, inv
  • Complete Pivoting LU Decomposition
  • Fix error of lu - initialize u

Release 0.4.0 (2018-10-23)

  • Remove non-necessary comments
  • Remove vec2mat, mat2vec
  • Change col, row functions
    • col, row returns Vec<f64>
  • Add diag
  • Add det
  • Add reduce in vector_macro
  • Add inv_l, inv_u
  • Add block, combine
  • Fix error of block, combine
  • Fix error of inv_l
  • Add inv

Release 0.3.1 (2018-10-21)

  • Remove Vector struct
    • Replace with vector_macro
    • c! & seq!
  • Make R-like matrix macro
    • matrix!(1;4;1, 2, 2, Row)

Release 0.3.0 (2018-10-20)

  • Vector
  • seq : moved from matrix to vector
  • Rename Generic trait - CreateMatrix

Release 0.2.5 (2018-10-19)

  • LU Decomposition

Release 0.2.4 (2018-10-19)

  • matrix function - Same as R
  • Fix README.md
  • More documentation

Release 0.2.3 (2018-10-18)

  • seq function - Same as R
  • Extract Col & Row
    • a.col(1) : Extract 1st column of a as Column matrix
    • a.row(1) : Extract 1st row of a as Row matrix

Release 0.2.1 (2018-10-04)

  • Update Documentation
    • Update README

Release 0.2.0 (2018-10-04)

  • Change structure
    • remove ozone