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Commits on May 30, 2023

• updated installation instructions in readme

  tandermann

  committed
  a2f9604

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• Merge pull request #37 from bmichanderson/patch4

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  tandermann

  authored
  4da54f5

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Commits on May 17, 2023

• avoid crash when no contigs found

  bmichanderson

  committed
  d1ff070

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Commits on Jun 7, 2022

• Merge pull request #34 from bmichanderson/paralogs_patch3

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  tandermann

  authored
  c5981ff

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• Merge pull request #32 from bmichanderson/paralogs_patch2

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  tandermann

  authored
  4457ef8

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• Merge pull request #31 from bmichanderson/parallel_patch

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  tandermann

  authored
  b80c4bd

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• Update paralogs_to_ref.py

  bmichanderson

  authored
  80803dc

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• Now corrected for numpy.int64 values

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  bmichanderson

  committed
  ef14cd5

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Commits on Jun 3, 2022

• Fix paralogs_to_ref.py to avoid genfromtxt

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  bmichanderson

  committed
  7a6cf2f

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• Remove space in first line of fasta align

  bmichanderson

  committed
  1da105e

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Commits on Jun 1, 2022

• Change parallel processing for assemble_reads.py

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  bmichanderson

  authored
  9ca8ec2

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Commits on May 31, 2022

• Merge pull request #29 from bmichanderson/master

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  tandermann

  authored
  0141550

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• Adjust paralogs_to_ref.py to account for hidden directories

  bmichanderson

  authored
  aa81423

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• Update paralogs_to_ref.py

  bmichanderson

  authored
  b1a5705

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Commits on May 10, 2022

• cleanup

  tandermann

  committed
  fb5c3a1

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• fixed bug in reference_assembly

  tandermann

  committed
  0694f1d

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• fixed bug in reference_assembly

  tandermann

  committed
  058b2b1

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Commits on Apr 11, 2022

• updated recipe

  

  Tobias Andermann

  committed
  7f6f27b

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• fixed longest common substring function

  

  Tobias Andermann

  committed
  d729f21

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Commits on Apr 7, 2022

• bugfix clean_reads

  

  Tobias Andermann

  committed
  a3fc104

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Commits on Mar 31, 2022

• mapping reads from multiple fastq files

  

  Tobias Andermann

  committed
  1dd1190

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• update

  

  Tobias Andermann

  committed
  96068e1

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Commits on Mar 30, 2022

• implemented fastp cleaning and adapter trimming

  

  Tobias Andermann

  committed
  35c47d9

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Commits on Mar 25, 2022

• cleaning works with zipped files

  

  Tobias Andermann

  committed
  0bcd2b9

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Commits on Mar 19, 2022

• added cores flag to quality_check function

  

  Tobias Andermann

  committed
  5682d7b

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• fixed help functino

  

  Tobias Andermann

  committed
  b345b74

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• updated recipe

  

  Tobias Andermann

  committed
  980e174

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Commits on Aug 18, 2021

• updated readme

  

  Tobias Andermann

  committed
  1e04b68

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• updated readme

  

  Tobias Andermann

  committed
  0328126

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• updated readme

  

  Tobias Andermann

  committed
  1bd840e

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• added tutorial

  

  Tobias Andermann

  committed
  2f4cd0c

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• added tutorial

  

  Tobias Andermann

  committed
  3b00e00

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Commits on Jul 18, 2021

• updated installation info to v2.2.3

  

  Tobias Andermann

  committed
  f69d669

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• cleaned up repo

  

  Tobias Andermann

  committed
  2b2f479

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• updated installation script

  

  Tobias Andermann

  committed
  f0f0889

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